Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tcaatttcaggacttgtatatttgattgcttgaatttttgagttgcaattttcctacttaatggttatggtttaacatgtattctttgtgtaaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCATACCTGAACACCTATGATGGTCGCACCATCCGTTACCCAGACCCTCTCA

Basic information

species Glycine max
transcript GLYMA02G43080.2
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA02G43080.2 (Glycine max), 3'ss of exon 4
lower sequence: Vv08s0058g00390.t01 (Vitis vinifera), 3'ss of exon 5
---tcaatttcaggacttgtatatttgattgcttgaatttttgagttgcaattttcctac-ttaatggttatggtttaacatgtattctttgtgtaaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCATACCTGAACACCTATGATGGTCGCACCATCCGTTACCCAGACCCTCTCA
     ||| |        | |  |||||  |  |   |||   |  | |    ||   || || ||| | ||| | | || |||  | ||| |||     |||||| ||||| |||||||| | |   || |||||||| |||||||| || ||||| |||||||||||||||||  | || ||||| |||||||| |||||||
agtgaaatcttctcgggggaagctttgaaagtcttt-tttacaaactactgcatttagacatttatgttaatgatatgacttgtggtttttttgt---ctgcagTTTAAGCTTTGCAAGGTCAAGGGTGTCCAGTTTGGGCAGAAAGGCATACCATATCTGAACACCTATGATGGGAGGACTATCCGCTACCCAGATCCTCTCA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254338889|gb|GR847606.1|GR847606
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|21602405|gb|BQ612736.1|BQ612736
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|6567163|gb|AW234786.1|AW234786
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|7147515|gb|AW509437.1|AW509437
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|6746785|gb|AW317241.1|AW317241
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGATTGGCCAGAGAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|193599445|gb|FK550204.1|FK550204
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|6951700|gb|AW423768.1|AW423768
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGAGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCC
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAG-GTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCC
EST: gi|4292427|gb|AI441903.1|AI441903
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCA
EST: gi|6502344|gb|AW203717.1|AW203717
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|9439986|gb|BE440497.1|BE440497
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|7926117|gb|AW832143.1|AW832143
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|213600643|gb|DB968775.1|DB968775
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|298176444|gb|HO026679.1|HO026679
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCGGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|4397449|gb|AI496446.1|AI496446
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGGTAGGTCAGTGCAGTTTGGCCAGAA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAA
EST: gi|8282832|gb|BE020393.1|BE020393
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|213601395|gb|DB968711.1|DB968711
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|12772358|gb|BG237285.1|BG237285
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|298180910|gb|HO022349.1|HO022349
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|298171801|gb|HO021393.1|HO021393
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAGGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|11687722|gb|BF595398.1|BF595398
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|10846499|gb|BF069362.1|BF069362
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGATGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCATAAATGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|12773098|gb|BG238025.1|BG238025
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|11413771|gb|BF425782.1|BF425782
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|6951685|gb|AW423753.1|AW423753
EST:     ACACTAAAAGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|27426851|gb|CA938371.1|CA938371
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|20498572|gb|BQ273502.1|BQ273502
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCA
EST: gi|24136781|gb|BU927291.1|BU927291
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|209711614|gb|BW671325.1|BW671325
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAA
EST: gi|8827735|gb|BE211465.1|BE211465
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAGAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|6719056|gb|AW306703.1|AW306703
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|209722813|gb|BW682886.1|BW682886
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|13787407|gb|BG649999.1|BG649999
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|209712826|gb|BW684181.1|BW684181
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|298190664|gb|HO032785.1|HO032785
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|14258782|gb|BG881690.1|BG881690
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|19934743|gb|BQ079773.1|BQ079773
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCG
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|8283599|gb|BE021158.1|BE021158
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAAGTTAGGTCAGTGCAGTTTGGCCAGAGAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|8284693|gb|BE022235.1|BE022235
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGNTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|4397095|gb|AI496092.1|AI496092
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAG-TTAGGTCAGTTGCAGTTTGGCCAG
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGT-GCAGTTTGGCCAG
EST: gi|213618083|gb|DB963716.1|DB963716
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|10847962|gb|BF071655.1|BF071655
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCA-TATTGGCCAGAAAGGTATCCC
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGT-TTGGCCAGAAAGGTATCCC
EST: gi|192323079|gb|FK017020.1|FK017020
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGT-AGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|213612156|gb|DB956865.1|DB956865
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|16996882|gb|BM086254.1|BM086254
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGGCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|7692719|gb|AW760819.1|AW760819
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|209714483|gb|BW684859.1|BW684859
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|4396174|gb|AI495171.1|AI495171
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|37993906|gb|CF805652.1|CF805652
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|37993916|gb|CF805662.1|CF805662
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|9440022|gb|BE440533.1|BE440533
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|213611713|gb|DB960641.1|DB960641
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|7327050|gb|AW620848.1|AW620848
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
EST: gi|19934720|gb|BQ079750.1|BQ079750
EST:     ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAG                         TTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA
genomic: ACACTAAAGGCCGATTCCGTCTCCATTCTGTCAGGGATGATGAGGCAAAGgtattttttt ... taaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

caattttcctacttaatggttatggtttaacatgtattctttgtgtaaatggcagTTCAAGCTCTGCAAGGTTAGGTCAGTGCAGTTTGGCCAGAAAGGTATCCCATACCTGAACACCTATGATGGTCGCACCATCCGTTACCCAGACCCTCTCA
                        gtttaac  putative branch site (score: 3)
         tacttaat  TA-rich tract