1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtatgactaggagtgtttgttggaaggtgaaacttggttttgatttgaattctgtgtgttcgccatctgatacgatgtttgtttttcagCTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGTAAAATAATTTTGTTAAGATACTTCAACCCAGTTGGTGCACACCCCAGTG
species | Glycine max |
transcript | GLYMA01G43540.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAG CTTATCATGTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGEST: gi|209713128|gb|BW653837.1|BW653837
genomic: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAGgtatgactag ... tgtttttcagCTTATCAT-TGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTG
EST: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAG CTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGTEST: gi|192299883|gb|FG990091.1|FG990091
genomic: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAGgtatgactag ... tgtttttcagCTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGT
EST: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAG CTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGTEST: gi|15000492|gb|BI321306.1|BI321306
genomic: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAGgtatgactag ... tgtttttcagCTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGT
EST: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAG CTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGTEST: gi|57574123|gb|CX547098.1|CX547098
genomic: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAGgtatgactag ... tgtttttcagCTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGT
EST: CCCATATGGACGAACTAAG CTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGTEST: gi|151398432|gb|EV268303.1|EV268303
genomic: CCCATATGGACGAACTAAGgtatgactag ... tgtttttcagCTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGT
EST: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGA-CTAAG CTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGTEST: gi|12489618|gb|BG043139.1|BG043139
genomic: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAGgtatgactag ... tgtttttcagCTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGT
EST: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAG CTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGTEST: gi|209699775|gb|BW652120.1|BW652120
genomic: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAGgtatgactag ... tgtttttcagCTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGT
EST: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAG CTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGT
genomic: GCACAGAAGAGTTCCCTCTGTCAGCAATGAACCCATATGGACGAACTAAGgtatgactag ... tgtttttcagCTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGT
tggttttgatttgaattctgtgtgttcgccatctgatacgatgtttgtttttcagCTTATCATTGAAGAAATTTGCCGTGATGTCCACTGTGCAGAGCCAGATTGTAAAATAATTTTGTTAAGATACTTCAACCCAGTTGGTGCACACCCCAGTG
atctgat putative branch site (score: 4)
tttgtttttc putative PPT
atttgaatt TA-rich tract