1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...tgtttagttgtgttgtcgttgattatatgtaattttttgtgactggtgcatggccttgtttagttttgtgttgtggttgatcatatgttttttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTTTTGATGACATTAAGAATAAGCGTCGCCGTGTACAGTGAGTTTTTGATG
species | Glycine max |
transcript | GLYMA01G43520.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTEST: gi|208325146|gb|GE124022.1|GE124022
genomic: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
EST: TGAAGGATGGGCTTCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTEST: gi|192320651|gb|FK012733.1|FK012733
genomic: TGAAGGATGGGCTTCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
EST: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTEST: gi|209697093|gb|BW667085.1|BW667085
genomic: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
EST: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTEST: gi|207825073|gb|GD797233.1|GD797233
genomic: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
EST: TCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTEST: gi|208138492|gb|GD935152.1|GD935152
genomic: TCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
EST: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTG GAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
genomic: AGATCTTGAAGGGCATTGAAGAGATGAAGGATGGGCTTCGTGCTTTCCTGgtatgttccc ... tttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTT
gtgcatggccttgtttagttttgtgttgtggttgatcatatgttttttgtgacagGAGTCTGCAGACTCGTCAAAGCCAATTACTGCTGCTGATGTCCACCAGTTTTTTGATGACATTAAGAATAAGCGTCGCCGTGTACAGTGAGTTTTTGATG
ggttgat putative branch site (score: 5)
tgtttttt putative PPT
atcatatgtttttt TA-rich tract