Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaattagtaacgaagagaagaatgttggaaagattttagggagactcaaattatgaactattggcaaaaacaattcataggcatagtgaagtatgttctcgctatatagttctggagacatgctagtgttacaatctgaaatttactgttttgttttaccaaccaaccgccatcttctttgtgtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCATGTTTATTGAAACTAGTGCTAAGGCTGGGTTTAATATAAAG

Basic information

species Glycine max
transcript GLYMA01G41100.1
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G41100.1 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM2G169694_T01 (Zea mays), 3'ss of exon 4
gtaattagtaacgaagagaagaatgttggaaagattttagggagactcaaattatgaactattggcaaaaacaattcataggcatagtgaagtatgttctcgcta-tatagttctggagacatgctagtgttacaatctgaaatttactgttttgttttaccaaccaaccgccatcttctttgtgtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCATGTTTATTGAAACTAGTGCTAAGGCTGGGTTTAATATAAAG
                                                                                            |  | ||||  || |||| |   ||     || |  |        ||||  |||  | | | |||   |  |    | |     |    ||        ||| |||||||| ||||||||||| || |  || ||    || ||    ||||||||||||||||| |||||||||||||||||||| || |||
---------------------------------------------------------------------------------------catgttccggtctccttaatataatatcgggagggtggtctttccctcccctgattttttttttatcgtt--gctgaatttctgttgcatctcatgga-----acagGCAAGTCTCAATAGAGGAAGGGGAGGGCAAGGCGAAGGACCTTGGAGTCATGTTTATTGAAACCAGTGCTAAGGCTGGGTTTAACATTAAG

upper sequence: GLYMA01G41100.1 (Glycine max), 3'ss of exon 4
lower sequence: GRMZM2G075719_T01 (Zea mays), 3'ss of exon 4
gtaattagtaacgaagagaagaatgttggaaagattttagggagactcaaattatgaactattggcaaaaacaattcataggcatagtgaagtatgttctcgctatat-agttc-tggagacatgctagtgttacaatctgaaatttactgttttgttttaccaaccaaccgccatcttctttgtgtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCATGTTTATTGAAACTAGTGCTAAGGCTGGGTTTAATATAAAG
                                                                                              |  ||| |    || |||||     ||  |  |  ||| |      ||| | |   | | |  | | |   | ||    |   | | |    ||    ||| |||||||| ||||||||||||||||  || |||   || ||   |||||||||||||||||| |||||||| ||||||||||| || |||
----------------------------------------------------------------------------------------------ttatcttgtagaatcagttcactttgaggtatttatgtaatttggagaagtatgtcgctcttatattcttgctaaaattctgttgcatctcatgga-acagGCAAGTCTCGATAGAGGAAGGAGAAGGCAAGGCAAAGGACCTTGGTGTCATGTTTATTGAAACCAGTGCTAAAGCTGGGTTTAACATTAAG

upper sequence: GLYMA01G41100.1 (Glycine max), 3'ss of exon 4
lower sequence: Vv15s0021g00640.t01 (Vitis vinifera), 3'ss of exon 4
gtaattagtaacgaagagaagaatgttggaaagattttagggagactcaaattatgaactattggcaaaaacaattcataggcatagtgaagtatgttctcgctatatagttctggagacatgctagtgttacaatctgaaatttactgttttgttttaccaaccaaccgccatcttctttgtgtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCATGTTTATTGAAACTAGTGCTAAGGCTGGGTTTAATATAAAG
                                                                                           | |        | ||| | |     |   |||   |  ||    | |     || || |||     | |  |   ||   |  |||   | ||  |   ||| ||||| |||||||||||||||||||| ||||| ||||| || ||||| |||||||| ||||||||||| ||||||||||| |||||||||
-------------------------------------------------------------------------------------------gcaaaagaaaaccataaaataaaacaagtatg--ggccttttttttttcctctttctttttctgcctgctcattcactcacggctttgctatgctttgacagGCAAGTGTCTATAGAGGAAGGAGAAGCTAAAGCTCGTGATCTAAATGTTATGTTTATCGAAACTAGTGCCAAGGCTGGGTTCAATATAAAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208219384|gb|GE020174.1|GE020174
EST:     GATGTCATTAGTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|254348135|gb|GR851814.1|GR851814
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|192322700|gb|FK014391.1|FK014391
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|208092652|gb|GD888471.1|GD888471
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|208330144|gb|GE132173.1|GE132173
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|254326476|gb|GR841068.1|GR841068
EST:     ATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: ATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193408283|gb|FK373645.1|FK373645
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193561935|gb|FK521196.1|FK521196
EST:     ATGTCATTATTGTTCTTGTTGGGAACAAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: ATGTCATTATTGTTCTTGTTGGGAAC-AAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193601113|gb|FK551700.1|FK551700
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTGTAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGT
EST: gi|208056039|gb|GD855468.1|GD855468
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193590328|gb|FK545356.1|FK545356
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAA
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAA
EST: gi|207847632|gb|GD819231.1|GD819231
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|12773416|gb|BG238343.1|BG238343
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193662854|gb|FK604846.1|FK604846
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|208095791|gb|GD894117.1|GD894117
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGG
EST: gi|208148670|gb|GD951196.1|GD951196
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTG
EST: gi|193379061|gb|FK344395.1|FK344395
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|254345172|gb|GR851548.1|GR851548
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|208141236|gb|GD938266.1|GD938266
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|208170472|gb|GD969707.1|GD969707
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAA
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAA
EST: gi|207761132|gb|GD733279.1|GD733279
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAA
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAA
EST: gi|193363487|gb|FK330413.1|FK330413
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAG
EST: gi|193443130|gb|FK405194.1|FK405194
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193477962|gb|FK440549.1|FK440549
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|23726564|gb|BU761278.1|BU761278
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193678654|gb|FK615404.1|FK615404
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTACAATGTCA
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCT-CAATGTCA
EST: gi|254322229|gb|GR837643.1|GR837643
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193387711|gb|FK350510.1|FK350510
EST:     TTGTTCTTGTTGGGAACAAAACTGANCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: TTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|208140551|gb|GD938673.1|GD938673
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAG
EST: gi|254348134|gb|GR851813.1|GR851813
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|207730206|gb|GD705022.1|GD705022
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193306298|gb|FK271403.1|FK271403
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGA
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGA
EST: gi|192322517|gb|FK014638.1|FK014638
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193452906|gb|FK420292.1|FK420292
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGNTCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGT
EST: gi|254319917|gb|GR830941.1|GR830941
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAA
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAA
EST: gi|208228124|gb|GE027352.1|GE027352
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|207810289|gb|GD781091.1|GD781091
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGACAAAAGCACGTG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAG-CAAAAGCACGTG
EST: gi|207797755|gb|GD771567.1|GD771567
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|208281690|gb|GE080656.1|GE080656
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGG
EST: gi|254321335|gb|GR824652.1|GR824652
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193446278|gb|FK413075.1|FK413075
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAG
EST: gi|193449830|gb|FK413477.1|FK413477
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|208166162|gb|GD963352.1|GD963352
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGT
EST: gi|193342303|gb|FK307221.1|FK307221
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|254345173|gb|GR851549.1|GR851549
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|208275862|gb|GE074268.1|GE074268
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGT
EST: gi|207713733|gb|GD694848.1|GD694848
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|208299062|gb|GE100493.1|GE100493
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGACAAAAGCACGTG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAG-CAAAAGCACGTG
EST: gi|193327422|gb|FK293891.1|FK293891
EST:     GATGTCATTATTGTTCTTGTTGG-AACAAA-CTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGG
EST: gi|208306094|gb|GE104915.1|GE104915
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGG
EST: gi|193584922|gb|FK542367.1|FK542367
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193372886|gb|FK333834.1|FK333834
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAAGCACGTGAG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAA-GCACGTGAG
EST: gi|207768880|gb|GD740131.1|GD740131
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|208146846|gb|GD945857.1|GD945857
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTNTAGAGGAAGGAG
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAG
EST: gi|254322230|gb|GR837644.1|GR837644
EST:     TGTCATTATTGTTCTTGTTGGGAACAAAAACTGATTCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: TGTCATTATTGTTCTTGTTGGGAAC-AAAACTGA-TCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|254318145|gb|GR832313.1|GR832313
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|254342458|gb|GR858620.1|GR858620
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
EST: gi|193372631|gb|FK337905.1|FK337905
EST:     GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAG                         ACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT
genomic: GATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTTGTTGAGAAAAGgtaattagta ... gtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCAT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gaaatttactgttttgttttaccaaccaaccgccatcttctttgtgtgtctgcagACAAGTCTCTATAGAGGAAGGAGAAGCAAAAGCACGTGAGCTCAATGTCATGTTTATTGAAACTAGTGCTAAGGCTGGGTTTAATATAAAG
           ttttgtttta  TA-rich tract