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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgtgcatgttttggtagatttctagcatagagtgaaaatgaattagtatacttttcttcatttttttctataaaaatttagtgatgttcatattaattgaatgatttgctttcattggaaaagATTGTCATATCTTTTTCTTCCAGTGTCTAAAATTAAGTGGTTACAG

Basic information

species Glycine max
transcript GLYMA20G08170.1
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tataaaaatttagtgatgttcatattaattgaatgatttgctttcattggaaaagATTGTCATATCTTTTTCTTCCAGTGTCTAAAATTAAGTGGTTACAG
                      tattaat  putative branch site (score: 2)
                                        ctttcatt  putative PPT
                  ttcatattaattgaat  TA-rich tract