1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtaagattaatgatctctttccttaaatatatgcattgctactattgttgtgaccttgtaaatttttgcagAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCCATATTTGCAGCACTT
species | Glycine max |
transcript | GLYMA19G45130.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGT AGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCCEST: gi|7042246|gb|AW472140.1|AW472140
genomic: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGTgtaagattaa ... atttttgcagAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCC
EST: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGT AGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCCEST: gi|213595224|gb|DB962363.1|DB962363
genomic: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGTgtaagattaa ... atttttgcagAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCC
EST: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGT AGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCCEST: gi|209706938|gb|BW683227.1|BW683227
genomic: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGTgtaagattaa ... atttttgcagAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCC
EST: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGT AGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCCEST: gi|207801336|gb|GD773448.1|GD773448
genomic: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGTgtaagattaa ... atttttgcagAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCC
EST: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGT AGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCCEST: gi|20814831|gb|BQ299309.1|BQ299309
genomic: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGTgtaagattaa ... atttttgcagAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCC
EST: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGT AGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCC
genomic: ACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGTgtaagattaa ... atttttgcagAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCC
ctttccttaaatatatgcattgctactattgttgtgaccttgtaaatttttgcagAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCCATATTTGCAGCACTT
tttttgc CT-rich tract
ttaaatatatgcatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagattaatgatctctttccttaaatatatgcattgctactattgttgtgaccttgtaaatttttgcagAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCCATATTTGCAGCACTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG