Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgattatttaattgtattattttaaagatgaaacaataaaccaatgagtgaaaatattgttgcctttaacttggttattctacatataaacaggttatggtgctaagtaattctgcaatggttgcatgatttgaattttgattgtttgtgtgcatgtgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCGACCTTGGAAGTAATCCAGAAAAAGA

Basic information

species Glycine max
transcript GLYMA19G37370.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G37370.2 (Glycine max), 3'ss of exon 3
lower sequence: GRMZM2G142640_T02 (Zea mays), 3'ss of exon 5
gtgattatttaattgtattattttaaagatgaaacaataaaccaatgagtgaaaatattgttgcctttaacttggttattctacatataaacaggttatggtgctaagtaattctgcaatggttgcatgatttgaattttgattgtttgtgtgcatgtgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCGACCTTGGAAGTAATCCAGAAAAAGA
                                                        || | | | ||| |    || ||  |    | |       |    |||| | ||||  ||| ||   |  ||   ||  ||  |  || ||| |||   |  |||||| |      ||||   ||||| || | ||||||| | || ||  |||| ||||| ||||| ||||| ||||| |||||  ||||||||||||||||||| ||||
--------------------------------------------------------atcgatccatttgatcatgtcatcgtttgcaaattatttctgccatgctta-taatagtgctataagtctatagcttacatgcttttttttt-tgtctgtagGATATCCA------TGCT---GAAGCGGTAAAGAAGAGGCGCCGCGCCACCAAGAAGCCATACTCCAGGTCAATTGTGGGTGCTTCCTTGGAAGTAATCCAGAAGAAGA

upper sequence: GLYMA19G37370.2 (Glycine max), 3'ss of exon 3
lower sequence: GRMZM2G074898_T03 (Zea mays), 3'ss of exon 4
gtgattatttaattgtattattttaaagatgaaacaataaaccaatgagtgaaaatattgttgcctttaacttggttattctacatataaacaggttatg--gtgctaagtaattctgc-aatggttgcatgatttgaattttgattgtttgtgtgcatgtgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCGACCTTGGAAGTAATCCAGAAAAAGA
                                                                    |||| |   |||  | | |  ||  | || ||   ||||||  |||  ||| |   ||     |  |   || || | ||| | ||| ||| || | | ||||||||   |   |||||||| | ||||||| | || ||  |||| ||||| ||||| ||||||||||| |||||  |||||||||| |||||||| ||||
------------------------------------------------------------------ccaactagacgattgca-acaacaattgtttctgccatgctaa-caatggtgctagaagtctagagcctctgatcttaaatgtatttgt-catttg-tctgtagGACATCCATGCTGAAGCTGTCAAGAAGAGGCGCCGCGCCACCAAGAAGCCATACTCGAGGTCCATTGTGGGTGCTTCCTTGGAAGTGATCCAGAAGAAGA

upper sequence: GLYMA19G37370.2 (Glycine max), 3'ss of exon 3
lower sequence: AT3G53020.1 (Arabidopsis thaliana), 3'ss of exon 3
gtgattatttaattgtattattttaaagatgaaacaataaaccaatgagtgaaaatattgttgcctttaacttggttattctacatataaacaggttatggtgctaagtaattctgcaatggttgcatgatttgaattttgattgtttgtgtgcatgtgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCGACCTTGGAAGTAATCCAGAAAAAGA
                                                || |||| |           ||||  || ||| |  || |     | |  | || ||  ||  || | || || |  | |||||||  ||   ||| |     |   | |  | | |||||    || ||||| ||||||| ||  |||||||||||  |||| ||||| ||||| ||||||||||||||||| |||||||||||||| ||||| ||||
------------------------------------------------gtaaaaaaaa----------aactcagtaatt-tggatctgttttgttgtttgtactttgttttttttcattgat--cctgatttg--ttaacattctaaaactctgtttcttttatagGATGCAGCACAAGAGGCTGTGAAGAGAAGGAGACGTGCCACCAAGAAGCCATACTCAAGGTCCATTGTTGGTGCTACCTTGGAAGTAATTCAGAAGAAGA

upper sequence: GLYMA19G37370.2 (Glycine max), 3'ss of exon 3
lower sequence: Vv08s0007g04210.t01 (Vitis vinifera), 3'ss of exon 3
gtgattatttaattgtattattttaaagatgaaacaataaaccaatgagtgaaaatattgttgcctttaacttggttattctacatataaacaggttatggtgctaagtaattctgcaatggttgcatgatttgaattttgattgtttgtgtgcatgtgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCGACCTTGGAAGTAATCCAGAAAAAGA
                                                          |||    | |   ||||| | | |    | ||  |  |       ||| |  ||| ||   | ||||   | | |   |||||| |   |   ||  | | ||    |||| ||||||||||| ||||| | ||||||| | |||||  |||||||||| ||||||||||||||||| ||||| || ||||| || |||||||| |  |
----------------------------------------------------------tgt-atatgtgttttggtcactttctggaaaagaatatc----cactatg-gattatgt--ttgttgggagttatttgttttgagtcactaattgggt-taatgctcagGATATTGCTCAAGAGGCTGTAAAGAAGAGGCGTCGTGCCACCAAAAAGCCCTACTCTAGGTCCATTGTGGGTGCTACATTGGAGGTTATCCAGAAGAGAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298196627|gb|HO041370.1|HO041370
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAGG                         GACAATGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298182269|gb|HO026444.1|HO026444
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|7232279|gb|AW567636.1|AW567636
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298188269|gb|HO034962.1|HO034962
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAGG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298168879|gb|HO009809.1|HO009809
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAGG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298172758|gb|HO020312.1|HO020312
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298164640|gb|HO014285.1|HO014285
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|16997149|gb|BM086521.1|BM086521
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298182020|gb|HO026195.1|HO026195
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|254334569|gb|GR844354.1|GR844354
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298168005|gb|HO013268.1|HO013268
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|209712790|gb|BW681646.1|BW681646
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|8670434|gb|BE191541.1|BE191541
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298198781|gb|HO042144.1|HO042144
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|192311894|gb|FK004525.1|FK004525
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|17963871|gb|BM270615.1|BM270615
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|16519552|gb|BI347337.1|BI347337
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298186572|gb|HO037205.1|HO037205
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|209703595|gb|BW683378.1|BW683378
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|12774578|gb|BG239505.1|BG239505
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|6454739|gb|AW185422.1|AW185422
EST:     GCCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: G-CCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298180603|gb|HO025690.1|HO025690
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|17021789|gb|BM092823.1|BM092823
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|254334570|gb|GR844355.1|GR844355
EST:     AGCCTTCAAAGCTCA-CTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|192311879|gb|FK004524.1|FK004524
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298180576|gb|HO025663.1|HO025663
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|12690015|gb|BG156351.1|BG156351
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|209722728|gb|BW669358.1|BW669358
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|192332354|gb|FK026019.1|FK026019
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|26045787|gb|CA783267.1|CA783267
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|193459300|gb|FK424683.1|FK424683
EST:     GGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: GGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|151405043|gb|EV274857.1|EV274857
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298182472|gb|HO031207.1|HO031207
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|193574461|gb|FK527958.1|FK527958
EST:     GGACTGCAATGTACAGAAAGCAACAC-AAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: GGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298180872|gb|HO022311.1|HO022311
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|6667095|gb|AW278554.1|AW278554
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|41146329|gb|CK606540.1|CK606540
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298182436|gb|HO026611.1|HO026611
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|207838568|gb|GD812428.1|GD812428
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAA
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAA-GAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAA
EST: gi|120491969|gb|EH220136.1|EH220136
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298198816|gb|HO042179.1|HO042179
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298173749|gb|HO017085.1|HO017085
EST:     AGCCTTCAGAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|209701237|gb|BW652685.1|BW652685
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|4294611|gb|AI442215.1|AI442215
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGA-ACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|16997034|gb|BM086406.1|BM086406
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298193836|gb|HO040484.1|HO040484
EST:     AGCCTTCAAAGCTCACCTGGACTGCAGTGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|192308434|gb|FK001364.1|FK001364
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|19934544|gb|BQ079574.1|BQ079574
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|193564840|gb|FK520067.1|FK520067
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|17401627|gb|BM178409.1|BM178409
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|192308433|gb|FK001363.1|FK001363
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|151393980|gb|EV263851.1|EV263851
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|58024091|gb|CX710832.1|CX710832
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|7147073|gb|AW508995.1|AW508995
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298175841|gb|HO015246.1|HO015246
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|192329665|gb|FK022931.1|FK022931
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298194903|gb|HO043375.1|HO043375
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|58016172|gb|CX702914.1|CX702914
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|20207617|gb|BQ133706.1|BQ133706
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|192323003|gb|FK016734.1|FK016734
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|31467521|gb|CD409549.1|CD409549
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|208176982|gb|GD976053.1|GD976053
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298191608|gb|HO039087.1|HO039087
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298174676|gb|HO014707.1|HO014707
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|192326181|gb|FK016283.1|FK016283
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTACTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|31466896|gb|CD408924.1|CD408924
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCGAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|209722729|gb|BW669359.1|BW669359
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|254318471|gb|GR832639.1|GR832639
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|254318470|gb|GR832638.1|GR832638
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|213608768|gb|DB962862.1|DB962862
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|58022367|gb|CX709108.1|CX709108
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|9203686|gb|BE329910.1|BE329910
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298196855|gb|HO041598.1|HO041598
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATCGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|7795764|gb|AW781161.1|AW781161
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|19269657|gb|BM885913.1|BM885913
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|193686292|gb|FK625979.1|FK625979
EST:     GAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: GAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|213602754|gb|DB980081.1|DB980081
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCAT-TCAAAAAGCC
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGC-TGCCAAAAAGCC
EST: gi|298199164|gb|HO042527.1|HO042527
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|207755150|gb|GD728849.1|GD728849
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGGGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298177594|gb|HO027261.1|HO027261
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|208276071|gb|GE074309.1|GE074309
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|20207602|gb|BQ133691.1|BQ133691
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298174314|gb|HO017650.1|HO017650
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|213607162|gb|DB967011.1|DB967011
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|151405307|gb|EV275121.1|EV275121
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|20449216|gb|BQ253340.1|BQ253340
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|209712789|gb|BW681645.1|BW681645
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|213599276|gb|DB962299.1|DB962299
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|192295183|gb|FG986902.1|FG986902
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|18041391|gb|BM309685.1|BM309685
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|6846853|gb|AW349143.1|AW349143
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|6072123|gb|AW101510.1|AW101510
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|208246935|gb|GE049419.1|GE049419
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GGCATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAA
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAA
EST: gi|7042519|gb|AW472413.1|AW472413
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|21602704|gb|BQ613035.1|BQ613035
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|208205416|gb|GE005323.1|GE005323
EST:     TGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: TGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|58017590|gb|CX704332.1|CX704332
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|8827300|gb|BE211030.1|BE211030
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|209721521|gb|BW672258.1|BW672258
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|58025425|gb|CX712166.1|CX712166
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|193351940|gb|FK316347.1|FK316347
EST:     GCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: GCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|298164318|gb|HO013963.1|HO013963
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|18711486|gb|BM522596.1|BM522596
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
EST: gi|151411612|gb|EV281423.1|EV281423
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT
genomic: AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAAAGgtgattattt ... tgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctgcaatggttgcatgatttgaattttgattgtttgtgtgcatgtgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCGACCTTGGAAGTAATCCAGAAAAAGA
                        ttttgat  putative branch site (score: 4)
                 atttgaattttgatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgattatttaattgtattattttaaagatgaaacaataaaccaatgagtgaaaatattgttgcctttaacttggttattctacatataaacaggttatggtgctaagtaattctgcaatggttgcatgatttgaattttgattgtttgtgtgcatgtgatatctagGACATTGCTCAAGAAGCTGTGAGGAAGAGGAGACGTGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCGACCTTGGAAGTAATCCAGAAAAAGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG