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...gcttatgactttggcgtgaagtttatttctttgtgtcactatttcattttgaatttcataacccatttatctattttaattaagaaaataaacttttcagATCCTGGAAGAAACATCTGCATTATCCAACCCTGGCAGTGGTGGACATGTTTTAGTTCAGTTTTATGGAAATCTTCCCAG
species | Glycine max |
transcript | GLYMA19G37070.4 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GGGCGAGGACAGATGGTCAAGTGTGGTGGCCTGCTGAG ATCCTGGAAGAAACATCTGCATTATCCAACCCTGGCAGTGGTGGACATGTTEST: gi|7284812|gb|AW597237.1|AW597237
genomic: GGGCGAGGACAGATGGTCAAGTGTGGTGGCCTGCTGAGgtatttacta ... aacttttcagATCCTGGAAGAAACATCTGCATTATCCAACCCTGGCAGTGGTGGACATGTT
EST: GAAATGTTGTATGGGCGAGGACAGATGGTCAAGTGTGGTGGCCTGCTGAG ATCCTGGAAGAAACATCTGCATTATCCAACCCTGGCAGTGGTGGACATGTTEST: gi|213613853|gb|DB971012.1|DB971012
genomic: GAAATGTTGTATGGGCGAGGACAGATGGTCAAGTGTGGTGGCCTGCTGAGgtatttacta ... aacttttcagATCCTGGAAGAAACATCTGCATTATCCAACCCTGGCAGTGGTGGACATGTT
EST: GAAATGTTGTATGGGCGAGGACAGATGGTCAAGTGTGGTGGCCTGCTGAG ATCCTGGAAGAAACATCTGCATTATCCAACCCTGGCAGTGGTGGACATGTT
genomic: GAAATGTTGTATGGGCGAGGACAGATGGTCAAGTGTGGTGGCCTGCTGAGgtatttacta ... aacttttcagATCCTGGAAGAAACATCTGCATTATCCAACCCTGGCAGTGGTGGACATGTT
attttgaatttcataacccatttatctattttaattaagaaaataaacttttcagATCCTGGAAGAAACATCTGCATTATCCAACCCTGGCAGTGGTGGACATGTTTTAGTTCAGTTTTATGGAAATCTTCCCAG
cttttc CT-rich tract
atttatctattttaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gcttatgactttggcgtgaagtttatttctttgtgtcactatttcattttgaatttcataacccatttatctattttaattaagaaaataaacttttcagATCCTGGAAGAAACATCTGCATTATCCAACCCTGGCAGTGGTGGACATGTTTTAGTTCAGTTTTATGGAAATCTTCCCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA