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ggtatggaatttattttctattcatatttgtttgcttggtttttgtttgtgatagtaatatgatcttttgttttttgtttactaacatctgatataacaGGAAGTACCTGAAAATAAGAGGCGTGTCTCTATTATAAAAGGCATTGTTATTGCAAGACGTAATGCTGGACTCAATACTACATTCAGAATTAGGAGGCAG
species | Glycine max |
transcript | GLYMA18G08770.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CAAAGAGAGATACCTGACATAAAGCCCGGTTATATTGTGCAACTCAAAGT GGAAGTACCTGAAAATAAGAGGCGTGTCTCTATTATAAAAGGCATTGTTATEST: gi|22928555|gb|BU545694.1|BU545694
genomic: CAAAGAGAGATACCTGACATAAAGCCCGGTTATATTGTGCAACTCAAAGTggtatggaat ... tgatataacaGGAAGTACCTGAAAATAAGAGGCGTGTCTCTATTATAAAAGGCATTGTTAT
EST: CAAAGAGAGATACCTGACATAAAGCCCGGTTATATTGTGCAACTCAAAGT GGAAGTACCTGAAAATAAGAGGCGTGTCTCTATTATAAAAGGCATTGTTATEST: gi|298194709|gb|HO043181.1|HO043181
genomic: CAAAGAGAGATACCTGACATAAAGCCCGGTTATATTGTGCAACTCAAAGTggtatggaat ... tgatataacaGGAAGTACCTGAAAATAAGAGGCGTGTCTCTATTATAAAAGGCATTGTTAT
EST: CAAAGAGAGATACCTGACATAAAGCCCGGTTATATTGTGCAACTCAAAGT GGAAGTACCTGAAAATAAGAGGCGTGTCTCTATTATAAAAGGCATTGTTATEST: gi|15286187|gb|BI470078.1|BI470078
genomic: CAAAGAGAGATACCTGACATAAAGCCCGGTTATATTGTGCAACTCAAAGTggtatggaat ... tgatataacaGGAAGTACCTGAAAATAAGAGGCGTGTCTCTATTATAAAAGGCATTGTTAT
EST: CAAAGAGAGATACCTGACATAAAGCCCGGTTATATTGTGCAACTCAAAGT GGAAATACCTGAAAATAAGAGGGGTGTCTCTATTATAAAAGGCATTGTTAT
genomic: CAAAGAGAGATACCTGACATAAAGCCCGGTTATATTGTGCAACTCAAAGTggtatggaat ... tgatataacaGGAAGTACCTGAAAATAAGAGGCGTGTCTCTATTATAAAAGGCATTGTTAT
gtttgtgatagtaatatgatcttttgttttttgtttactaacatctgatataacaGGAAGTACCTGAAAATAAGAGGCGTGTCTCTATTATAAAAGGCATTGTTATTGCAAGACGTAATGCTGGACTCAATACTACATTCAGAATTAGGAGGCAG
taatatgatcttttgt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ggtatggaatttattttctattcatatttgtttgcttggtttttgtttgtgatagtaatatgatcttttgttttttgtttactaacatctgatataacaGGAAGTACCTGAAAATAAGAGGCGTGTCTCTATTATAAAAGGCATTGTTATTGCAAGACGTAATGCTGGACTCAATACTACATTCAGAATTAGGAGGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA