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ttagtaccttctaatctgtttattattatatttagtaaaaaggaaaatctaatataaatatatagaagttcatttgaatgaccctctaatatgtgagagcttaatttgattttagaTGATGGGTTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAGACTATGGTGAACAAAGGAGTGTTTGTAGCTGTTGGACGCCAGATTGGTGTT
species | Glycine max |
transcript | GLYMA18G04910.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TTGAAAAACTTGCTCAAACACAAGTTGTTGCATCACGACTCTTCTAAATA TGATGGGTTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAGACEST: gi|298168888|gb|HO009818.1|HO009818
genomic: TTGAAAAACTTGCTCAAACACAAGTTGTTGCATCACGACTCTTCTAAATGttagtacctt ... tgattttagaTGATGGGTTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAGAC
EST: TTGAAAAACTTGCTCAAACACAAGTTGTTGCATCACGACTCTTCTAAATA TGATGGGTTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAGAC
genomic: TTGAAAAACTTGCTCAAACACAAGTTGTTGCATCACGACTCTTCTAAATGttagtacctt ... tgattttagaTGATGGGTTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAGAC
atagaagttcatttgaatgaccctctaatatgtgagagcttaatttgattttagaTGATGGGTTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAGACTATGGTGAACAAAGGAGTGTTTGTAGCTGTTGGACGCCAGATTGGTGTT
ttaatttgattttaga TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ttagtaccttctaatctgtttattattatatttagtaaaaaggaaaatctaatataaatatatagaagttcatttgaatgaccctctaatatgtgagagcttaatttgattttagaTGATGGGTTCCGCCTTACCTACCTTGGTTATGATTTTCTTGCCATTAAGACTATGGTGAACAAAGGAGTGTTTGTAGCTGTTGGACGCCAGATTGGTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT