1 5' 3' | 2 5' 3' | 3 5' 3' |
...tatttgttgcctgctttattttttttttgtgtctatggcaattggattatataaataaacacataactcatacttgtttgcacactcttgatatttacagGAACCCTATCAGCTGGTTGGAACTACTGTTGCTGACCCCTTGGATGAATTCAAGAAAGCAGTGGTATCCATCATAGAGGAATATTTCAGTAATGGGGATG
species | Glycine max |
transcript | GLYMA17G13570.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
attatataaataaacacataactcatacttgtttgcacactcttgatatttacagGAACCCTATCAGCTGGTTGGAACTACTGTTGCTGACCCCTTGGATGAATTCAAGAAAGCAGTGGTATCCATCATAGAGGAATATTTCAGTAATGGGGATG
ataaataaacacataa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tatttgttgcctgctttattttttttttgtgtctatggcaattggattatataaataaacacataactcatacttgtttgcacactcttgatatttacagGAACCCTATCAGCTGGTTGGAACTACTGTTGCTGACCCCTTGGATGAATTCAAGAAAGCAGTGGTATCCATCATAGAGGAATATTTCAGTAATGGGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - tgttgcc
- - - - - -tgcttta
- - - - - - - - - - - - - - - gtctatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - -aacacat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cacactc