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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtcctttatccatcattctgtatacatatgaaactgtcctctgatatgttttttctgaacttttcttacagTCCTAATTCCCCACATTTAGCTTCAGTTGTGTCACCACCAGGCAAAGCTACAAATACACCTCTAGTCCGGTGCACGAATCACATGTGTCCTATTCGAGTG

Basic information

species Glycine max
transcript GLYMA17G08830.1
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctgtatacatatgaaactgtcctctgatatgttttttctgaacttttcttacagTCCTAATTCCCCACATTTAGCTTCAGTTGTGTCACCACCAGGCAAAGCTACAAATACACCTCTAGTCCGGTGCACGAATCACATGTGTCCTATTCGAGTG
                      ctctgat  putative branch site (score: 4)
                                           cttttcttac  putative PPT
                           atatgtttttt  TA-rich tract