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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgggagaaagaaaattaatgaaatatgtataggatgtgcttccggggaagatactattgtatgtgcaagtgtaactgttccttcctctttgtgacttcaaagtctgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATCAAATAAGACAGGTCCTCTCAGTATATTTGCTTAATATGGTGTGGCATGG

Basic information

species Glycine max
transcript GLYMA13G40030.1
intron # 3
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208141456|gb|GD937394.1|GD937394
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193365286|gb|FK329735.1|FK329735
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207767241|gb|GD739653.1|GD739653
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGG
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGG
EST: gi|207729085|gb|GD704853.1|GD704853
EST:     TCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: TCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193310101|gb|FK275929.1|FK275929
EST:     CAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: CAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207824708|gb|GD795944.1|GD795944
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCAT
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCAT
EST: gi|31466580|gb|CD408608.1|CD408608
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207842715|gb|GD816415.1|GD816415
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208153073|gb|GD949184.1|GD949184
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAGGATAGTAGAAG                         GGTTTGGATCACAGGAA
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAA
EST: gi|208179354|gb|GD976577.1|GD976577
EST:     CAAAAAGATTTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: CAAAAAGA-TTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208035050|gb|GD836346.1|GD836346
EST:     ATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: ATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208193324|gb|GD992055.1|GD992055
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208194765|gb|GD989378.1|GD989378
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCT
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCT
EST: gi|208116466|gb|GD916751.1|GD916751
EST:     AAGATAGTAGAAG                         GGTTTTGGTATTCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGC
genomic: AAGATAGTAGAAGgtgggagaaa ... tgttttgcagGG-TTTGG-A-TCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGC
EST: gi|207770551|gb|GD742893.1|GD742893
EST:     AAAAAGATTTGTACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: AAAAAGA-TTG-ACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208068693|gb|GD864107.1|GD864107
EST:     CAAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: CAAAAA-GATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208309692|gb|GE107250.1|GE107250
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208046527|gb|GD844295.1|GD844295
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207842659|gb|GD815967.1|GD815967
EST:     CAAAAAAGNTTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAA
genomic: CAAAAA-GATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAA
EST: gi|208204067|gb|GE006928.1|GE006928
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATG
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATG
EST: gi|193558728|gb|FK512929.1|FK512929
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208174752|gb|GD970337.1|GD970337
EST:     GCAAAAAGATTGACCATTCTGCCGGGTTCAAACAACAAGGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193312991|gb|FK282376.1|FK282376
EST:     GACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193432054|gb|FK393852.1|FK393852
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208178748|gb|GD975257.1|GD975257
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207697889|gb|GD680058.1|GD680058
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207787244|gb|GD758769.1|GD758769
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGGTCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193379929|gb|FK346347.1|FK346347
EST:     CAAAAAGAATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: CAAAAAG-ATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208281975|gb|GE080185.1|GE080185
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGA
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGA
EST: gi|208112666|gb|GD909255.1|GD909255
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208077404|gb|GD876979.1|GD876979
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGCAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193362969|gb|FK328733.1|FK328733
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCAT
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTT-GGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCAT
EST: gi|193483849|gb|FK449340.1|FK449340
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|31306707|gb|CD391910.1|CD391910
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193357243|gb|FK321559.1|FK321559
EST:     CAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCAT
genomic: CAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAG-AAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCAT
EST: gi|208110475|gb|GD911861.1|GD911861
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193557662|gb|FK511975.1|FK511975
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193382866|gb|FK347729.1|FK347729
EST:     TGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: TGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|31467733|gb|CD409761.1|CD409761
EST:     GCTAAAAGATTGACCATTCTGACGGATTCATACTACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGCACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208213816|gb|GE009669.1|GE009669
EST:     GCAAAAAGATCGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCAT
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCAT
EST: gi|193522360|gb|FK477795.1|FK477795
EST:     TTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: TTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207700902|gb|GD682791.1|GD682791
EST:     AAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: AAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208281978|gb|GE079306.1|GE079306
EST:     TTCAAACAACAAAGATAG-AGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: TTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193485221|gb|FK449057.1|FK449057
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193663052|gb|FK605772.1|FK605772
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGA
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGA
EST: gi|193351531|gb|FK315091.1|FK315091
EST:     TTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATTCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCAT
genomic: TTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGA-TCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCAT
EST: gi|208061043|gb|GD858393.1|GD858393
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGA
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGA
EST: gi|208131283|gb|GD931170.1|GD931170
EST:     TTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: TTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208314509|gb|GE113845.1|GE113845
EST:     CAAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: C-AAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193596349|gb|FK553104.1|FK553104
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193381963|gb|FK348464.1|FK348464
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208162562|gb|GD964777.1|GD964777
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208308241|gb|GE102851.1|GE102851
EST:     GCAAAAAGNTTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTG-ATCACAGGAA
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAA
EST: gi|12688285|gb|BG154621.1|BG154621
EST:     GC-AAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208238609|gb|GE037611.1|GE037611
EST:     ACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: ACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208288504|gb|GE088773.1|GE088773
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208132151|gb|GD929034.1|GD929034
EST:     ATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: ATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208325522|gb|GE120184.1|GE120184
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193692885|gb|FK627150.1|FK627150
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208216644|gb|GE013444.1|GE013444
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208035921|gb|GD836902.1|GD836902
EST:     TTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: TTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193712942|gb|FK651477.1|FK651477
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|12688244|gb|BG154580.1|BG154580
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193316514|gb|FK279430.1|FK279430
EST:     CAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: CAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208084536|gb|GD884976.1|GD884976
EST:     TTCAAACAACGAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: TTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208200209|gb|GE001277.1|GE001277
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193499331|gb|FK460328.1|FK460328
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGG
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGG
EST: gi|208092831|gb|GD886004.1|GD886004
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208097719|gb|GD891816.1|GD891816
EST:     ACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: ACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208208388|gb|GE004305.1|GE004305
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACA
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACA
EST: gi|208320254|gb|GE122059.1|GE122059
EST:     CAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: CAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208064692|gb|GD865072.1|GD865072
EST:     CAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: CAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193485307|gb|FK450753.1|FK450753
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAGTGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207817737|gb|GD791042.1|GD791042
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208253120|gb|GE051570.1|GE051570
EST:     TGACGGAATTCAAACTAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: TGACGG-ATTCAAAC-AACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208209264|gb|GE008140.1|GE008140
EST:     AAAAAGATTGACCATTTCTGACGGATTCAAGCAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: AAAAAGATTGACCA-TTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207785370|gb|GD759121.1|GD759121
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207817588|gb|GD791425.1|GD791425
EST:     CATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGGACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: CATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207831833|gb|GD804337.1|GD804337
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|31471719|gb|CD413747.1|CD413747
EST:     AAAAGATTGACCATTCTGACGGATTCAAACAACCAAGATAGTAGAAG                         GTTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATCCTGCATC
genomic: AAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207796171|gb|GD769324.1|GD769324
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGAACACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193663273|gb|FK604061.1|FK604061
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193689325|gb|FK630458.1|FK630458
EST:     AGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: AGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193395987|gb|FK361406.1|FK361406
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208241492|gb|GE036388.1|GE036388
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|207713280|gb|GD695725.1|GD695725
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|208169162|gb|GD971785.1|GD971785
EST:     GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: GCAAAAAGATTGACCATTCTGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
EST: gi|193435318|gb|FK399888.1|FK399888
EST:     AAAAGATTGACCTATTTCTTGACGGATTCAAACAACAAAGATAGTAGAAG                         GGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC
genomic: AAAAGATTGACC-A-TTC-TGACGGATTCAAACAACAAAGATAGTAGAAGgtgggagaaa ... tgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tatgtgcaagtgtaactgttccttcctctttgtgacttcaaagtctgttttgcagGGTTTGGATCACAGGAACTCGAAATGCTGAACATGGATTGGATGCTGCATCAAATAAGACAGGTCCTCTCAGTATATTTGCTTAATATGGTGTGGCATGG
         gtgtaac  putative branch site (score: 3)
                                           tctgtttt  putative PPT