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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtattgctttcttctctgtagattttttttgaatatattattcattattggtctcttttttttcctactagtatttaggcatgatcaatgatgtgcattgttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA

Basic information

species Glycine max
transcript GLYMA12G15420.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA12G15420.1 (Glycine max), 3'ss of exon 3
lower sequence: LOC_Os08g27850.2 (Oryza sativa), 3'ss of exon 3
-------gtattgctttcttctctgtagattttttttgaatatattattcattattg-gtctcttttttttcctactagtatttaggcatgatcaatgatgtgcattgttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA
       ||    |  |    | |    ||||  |     || ||||    |||      |   |         ||||   || |   |  ||  ||| ||||  |||  |    ||| |||||||||||||||| || ||||||||||||||||||||||| || || ||||| ||||||||||| || |||||| | ||||||||||||||| |||
gtgccctgtccaaccatacaattttagaatttcctagcgttacattaacttttaccacagccactcgcacatacactaaccttcaactaaaat--atggtgtgttttgcaa---acagATGATCAATGAGAAGCCCCAGGTGATCCAGGAGTACGAGTCAGGTAAAGCTATTCCGAACCAGCAGATCATCGGGAAGCTTGAAAGGGCTCTTGGAACAA

upper sequence: GLYMA12G15420.1 (Glycine max), 3'ss of exon 3
lower sequence: GRMZM2G101480_T01 (Zea mays), 3'ss of exon 3
gtattgctttcttctctgtagattttttttgaatatattattcattattggtctcttttttttcctactagtatttaggcatgatcaatgatgtgcattgttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA
         |||   |||| |  || |  |   |  |||  |   |          ||  |       | |  | |      ||| |  ||| ||   ||||  |||||| |||||||||||||||| || |||||||||||||| |||||||| ||||| ||||| ||||||||||| ||||| ||| | || ||||| || ||| | |
-----aaagtctatgctgttg--ttgtagtagttccattgatagctgggaagtagcttgatccttggttggcctctttatgagatgag-gatatgg--tgttcattgcagATGATCAATGAGAAGCCACAGGTGATCCAGGAGTATGAGTCAGGCAAGGCAATTCCCAACCAGCAGATCATTGGCAAGCTCGAGAGGGCCCTGGGAACGA

upper sequence: GLYMA12G15420.1 (Glycine max), 3'ss of exon 3
lower sequence: GRMZM5G800112_T01 (Zea mays), 3'ss of exon 3
gtattgctttcttctctgtag-attttttttgaatatattattcattattggtctct--tttttttcctactagtatttaggcatgatcaatgatgtgcattgttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA
        | |||    |||  |||   ||| |  |  | |  |||   ||     |   ||  | | |  | |   |            | ||||||   ||||  ||| || |||| ||||||||||| || ||||| |||||||| || ||||| ||||| || || ||||||||||| ||| | |                        
-------gtacttggtggtatcattgggtttcagaacttcaaccatagctgagaagtagcttgatccttgtttggcctattaatcagATGAGGATGTGG--TGTTTATTGTAGATGATAAATGAGAAGCCACAGGTGATTCAGGAGTATGAATCAGGCAAGGCAATCCCCAACCAGCAGATCATTAGCA------------------------

upper sequence: GLYMA12G15420.1 (Glycine max), 3'ss of exon 3
lower sequence: GRMZM5G800112_T02 (Zea mays), 3'ss of exon 3
gtattgctttcttctctgtag-attttttttgaatatattattcattattggtc--tcttttttttcctactagtatttaggcatgatcaatgatgtgcattgttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA
        | |||    |||  |||   ||| |  |  | |  |||   ||     |   ||  | | |  | |   |            | ||||||   ||||  ||| || |||| ||||||||||| || ||||| |||||||| || ||||| ||||| || || ||||||||||| ||| | ||| | || ||||| || ||| | |
-------gtacttggtggtatcattgggtttcagaacttcaaccatagctgagaagtagcttgatccttgtttggcctattaatcagatgaggatgtgg--tgtttattgtagATGATAAATGAGAAGCCACAGGTGATTCAGGAGTATGAATCAGGCAAGGCAATCCCCAACCAGCAGATCATTAGCAAGCTCGAGAGGGCCCTGGGAACCA

upper sequence: GLYMA12G15420.1 (Glycine max), 3'ss of exon 3
lower sequence: AT3G58680.1 (Arabidopsis thaliana), 3'ss of exon 3
gtattgctttcttctctgtagattttttttgaatatattattcattattggtctcttttttttcctactagtatttaggcat--gatcaatgatgtgcattgttact-tgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA
                        |  |||    || ||  ||  |||   ||||||| |||| ||     |  | ||  ||   ||  ||  | ||  || | | | || ||||||||||||||||||| ||||||||||| || |||||||| ||||| || ||||| || || |||||  ||   ||| |||| ||||| ||||| || |
-----------------------gtacttt---catttttctctgtatctttctctttcttttactgtctttcgtcagtaattgaattcattgtatgggttttgattctgtagCTGATCAATGAGAAGCCACAAGTGATCCAAGAATACGAGTCTGGGAAAGCAATTCCGAATCAACAGATCCTTTCAAAGCTGGAGAGGGCACTTGGTGCTA

upper sequence: GLYMA12G15420.1 (Glycine max), 3'ss of exon 3
lower sequence: Vv12s0028g02020.t01 (Vitis vinifera), 3'ss of exon 3
gtattgctttcttctctgtagattttttttgaatatattattcattattggtctcttttttttcctactagtatttaggcatgatcaatgatgtgcattgttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA
                 ||| || ||| |        |||  || |||  || || | |       ||| ||||  ||   ||   |||||  || |   ||  |||||| ||||||||||||| |||||| | || || ||||| || || || || || |||||||| || ||||||||||  |||||||| |||||||||||||  |
-----------------gtaaatctttctc-----ccttacccaatat--gtatcctctccactgcactcgtat--agaactgcataatgaaatggagc-ttgtttgcagATGATCAATGAGAAACCTCAAATAATTCAAGAGTATGAATCTGGTAAAGCTATTCCAAATCAACAGATAATTGTCAAGTTGGAGAGGGCTCTTGGAGTGA

upper sequence: GLYMA12G15420.1 (Glycine max), 3'ss of exon 3
lower sequence: Vv19s0014g01260.t01 (Vitis vinifera), 3'ss of exon 3
gtattgctttcttctctgtagattttttttgaatatattattcattattggtctcttttttttccta-ctagtatttaggcatgatcaatgatgtgcattgttac---ttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA
                                 ||| |       | || |||    | | ||||||  | ||| |||  |       |   ||  | ||||||    |||||| |||| ||||||||||| |||||||| || ||||| |||||||| || ||||||||||| || ||||||||    ||  |||||||||||||||| |  |
--------------------------------gtatctctccttctttttgtccggctctgttcctagttcgtacttaatctaatatcactttgatcgttgttatattttgcagATGATTAATGAGAAGCCCCAAGTGATACAAGAGTATGAGTCAGGAAAAGCCATTCCAAATCAACAGATAATCACCAAACTGGAAAGGGCTCTTGGTGTGA

upper sequence: GLYMA12G15420.1 (Glycine max), 3'ss of exon 3
lower sequence: EFJ33541 (Selaginella moellendorffii), 3'ss of exon 3
gtattgctttcttctctgtagattttttttgaatatattattcattattggtctcttttttttcctactagtatttaggcatgatcaatgatgtgcattgttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA
                           |||| ||   | |||| |   |||| | || |||||        |  || |   |  |   || | ||| | ||      ||||||||||| ||||||||||| || ||||| ||||| || || || || ||||| || ||||||||||| ||    ||| | ||  | || || ||||| |
--------------------------gtttggatgattgattctt---tggttttttctttttggc-----tgatttgttttccttgttggtttgcttggtc-----cagCTGATCAACGAGAAGCCTCAGGTCATCCAAGAGTATGAATCGGGAAAAGCCATCCCCAACCAGCAGATCATCTCCAAGCTCGAGCGCGCGCTGGGAGCCA

upper sequence: GLYMA12G15420.1 (Glycine max), 3'ss of exon 3
lower sequence: EFJ36890 (Selaginella moellendorffii), 3'ss of exon 3
gtattgctttcttctctgtagattttttttgaatatattattcattattggtctcttttttttcctactagtatttaggcatgatcaatgatgtgcattgttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA
                           |||| ||   | |||| ||  | || |||||||   |  | | || ||         |   || | ||| | ||      ||||||||||| ||||||||||| || ||||| ||||| || || || || ||||| || ||||||||||||||    ||| | ||  | || || ||||| |
--------------------------gtttggatgattgattctttggttgtgtctttttgg-ctgatttgttttcc-------ttgttggtttgcttggtc-----cagCTGATCAACGAGAAGCCTCAGGTCATCCAAGAGTATGAATCTGGAAAAGCCATCCCCAACCAGCAGATAATCTCCAAGCTCGAGCGCGCGCTGGGAGCCA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15664422|gb|BI701793.1|BI701793
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|10847759|gb|BF070395.1|BF070395
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAATCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|298163995|gb|HO013640.1|HO013640
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|298193081|gb|HO033515.1|HO033515
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|207785970|gb|GD756137.1|GD756137
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|120495398|gb|EH223565.1|EH223565
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|120495990|gb|EH224157.1|EH224157
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|6725295|gb|AW309694.1|AW309694
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|298198641|gb|HO040180.1|HO040180
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|9902085|gb|BE611053.1|BE611053
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|10235229|gb|BE804176.1|BE804176
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|10235977|gb|BE804865.1|BE804865
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCATGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCATGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|10844320|gb|BF067629.1|BF067629
EST:     TAATGCAAGCTACGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCANGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|23730351|gb|BU763268.1|BU763268
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|120495988|gb|EH224155.1|EH224155
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|120495264|gb|EH223431.1|EH223431
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|193628139|gb|FK578419.1|FK578419
EST:     GGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCTGGAGTACGAGTCAGGGAAGGCC
genomic: GGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|7147450|gb|AW509372.1|AW509372
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|31463062|gb|CD405090.1|CD405090
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|7685112|gb|AW755760.1|AW755760
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|27809265|gb|CB063687.1|CB063687
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGGAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|19346115|gb|BM890995.1|BM890995
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|209716104|gb|BW668643.1|BW668643
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|31461055|gb|CD403083.1|CD403083
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|31310981|gb|CD396184.1|CD396184
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|26269232|gb|CA820295.1|CA820295
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGTTAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|254331088|gb|GR842353.1|GR842353
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|31459179|gb|CD401207.1|CD401207
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|21887676|gb|BQ740889.1|BQ740889
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|15000360|gb|BI321174.1|BI321174
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|17023283|gb|BM094317.1|BM094317
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|12773120|gb|BG238047.1|BG238047
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCATGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|33389507|gb|CA852714.1|CA852714
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|26047393|gb|CA784200.1|CA784200
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|7028127|gb|AW457910.1|AW457910
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|7146182|gb|AW508167.1|AW508167
EST:     TAATGCAAGCTAGGATGGACAAGAGACTCACTCATGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCATGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|298168480|gb|HO009410.1|HO009410
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|193586609|gb|FK543941.1|FK543941
EST:     CTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: CTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|11687714|gb|BF595390.1|BF595390
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|10845945|gb|BF068955.1|BF068955
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|27446138|gb|CA953261.1|CA953261
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|193345969|gb|FK310455.1|FK310455
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAG
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAG
EST: gi|11688441|gb|BF596117.1|BF596117
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|7692167|gb|AW760281.1|AW760281
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCATGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|11688433|gb|BF596109.1|BF596109
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|298183608|gb|HO028821.1|HO028821
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|7691241|gb|AW759372.1|AW759372
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCATGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCGAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|254336558|gb|GR842737.1|GR842737
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|27446370|gb|CA953493.1|CA953493
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAAAAGCCTCAAGTGATCCAGGAGTACGAATCGAGG-AAGGC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTC-AGGGAAGGC
EST: gi|298179952|gb|HO025167.1|HO025167
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|151400091|gb|EV269905.1|EV269905
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|254326155|gb|GR840747.1|GR840747
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|298167378|gb|HO012641.1|HO012641
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|14259931|gb|BG882839.1|BG882839
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|6482446|gb|AW201705.1|AW201705
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|6069595|gb|AW099256.1|AW099256
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|21256329|gb|BQ453217.1|BQ453217
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|9440041|gb|BE440552.1|BE440552
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|298163845|gb|HO012578.1|HO012578
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|10846727|gb|BF071410.1|BF071410
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|23730590|gb|BU763381.1|BU763381
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|14012141|gb|BG727063.1|BG727063
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|11274236|gb|BF324604.1|BF324604
EST:     TAATGCAAGCTAGGATGGACAAGANACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|19453675|gb|BM955085.1|BM955085
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
EST: gi|19348136|gb|BM892668.1|BM892668
EST:     TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAA                         CTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC
genomic: TAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAGCTTGCTCAAgtattgcttt ... ttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttttttttcctactagtatttaggcatgatcaatgatgtgcattgttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA
             tagtattta  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtattgctttcttctctgtagattttttttgaatatattattcattattggtctcttttttttcctactagtatttaggcatgatcaatgatgtgcattgttacttgcagCTGATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGGGAAGTTGGAAAGGGCTCTTGGAGCAA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCA