1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtattctacattgacattactcgtttattattttaaaatgtttgtgttgtgtttgtcacttctctaatgattttggtgtttggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCTTTACGTCTCTGCATCACACTAAAAACTGTGGGATCATATTTCGTGGGC
species | Glycine max |
transcript | GLYMA09G01270.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCEST: gi|18692857|gb|BM521705.1|BM521705
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCEST: gi|213616587|gb|DB967545.1|DB967545
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTGGAGTTGCTTCTCCCCTGT-GCTGTTGGGGACTACACCGATTTEST: gi|254346898|gb|GR856620.1|GR856620
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCC-TGTTGCTGTTGGGGACTACACCGATTT
EST: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCEST: gi|213594530|gb|DB957977.1|DB957977
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCEST: gi|213601975|gb|DB976222.1|DB976222
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: ACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTAGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCEST: gi|151410471|gb|EV280286.1|EV280286
genomic: ACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCEST: gi|19453154|gb|BM954564.1|BM954564
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCEST: gi|7924174|gb|AW830200.1|AW830200
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCEST: gi|16996748|gb|BM086120.1|BM086120
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCEST: gi|15664491|gb|BI701862.1|BI701862
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCEST: gi|192327116|gb|FK015508.1|FK015508
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
EST: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATG AGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
genomic: CAACCTTGAGGGACAATGCGGTTTTGAGGCAGAAAGCACTTGTGCCTATGgtattctaca ... ggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTC
aatgtttgtgttgtgtttgtcacttctctaatgattttggtgtttggattttcagAGTAGTGTGGAGTTGCTTCTCCCTGTTGCTGTTGGGGACTACACCGATTTCTTTACGTCTCTGCATCACACTAAAAACTGTGGGATCATATTTCGTGGGC
ctctaat putative branch site (score: 3)
ttttc putative PPT
taatgatttt TA-rich tract