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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttttaaggggacctttcggatacctttgctgcactataaaatttaatatggtatcagagtcatagtctgtttctgtccgacggtatccacacttttatgaccgatgggagtgcatcttatcaacaatacaaatcacatcaacctttgatttcttctaccgttggagAAGGACCAACAAATTCAGGGTCAAAGTCACATTCATCACATCCCAGTTTAT

Basic information

species Glycine max
transcript GLYMA08G20870.1
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcatcttatcaacaatacaaatcacatcaacctttgatttcttctaccgttggagAAGGACCAACAAATTCAGGGTCAAAGTCACATTCATCACATCCCAGTTTAT
                               ctttgat  putative branch site (score: 5)
                                     tttcttctaccgtt  CT-rich tract
             aatacaaat  TA-rich tract