1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...ttctatataagcaaaatagtttcacgatatatttagcctatttgttttaggagaaataaccattgatgatatcttggtttgtttgcttgatttgtttcagGCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCTCTTTGCCCCCTCATTCGTGGATATTAACCGGGCTGTGCAGTTCATTCATC
species | Glycine max |
transcript | GLYMA08G03600.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TTACTCTCAATGAGCCCTACGAAACCTTGGTGCCATCGTCGTTGTATCAT GCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCTCTTTGCCEST: gi|6455181|gb|AW185864.1|AW185864
genomic: TTACTCTCAATGAGCCCTACGAAACCTTGGTGCCATCGTCGTTGTATCATgtaagccata ... tttgtttcagGCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCTCTTTGCC
EST: TTACTCTCAATGAGCCCTACTAAACCTTGGTGCCATCGTCGTTGTATCAT GCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCTEST: gi|7589646|gb|AW705416.1|AW705416
genomic: TTACTCTCAATGAGCCCTACGAAACCTTGGTGCCATCGTCGTTGTATCATgtaagccata ... tttgtttcagGCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCT
EST: TTACTCTCAATGAGCCCTACGAAACCTTGGTGCCATCGTCGTTGTATCAT GCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATEST: gi|19453452|gb|BM954862.1|BM954862
genomic: TTACTCTCAATGAGCCCTACGAAACCTTGGTGCCATCGTCGTTGTATCATgtaagccata ... tttgtttcagGCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTAT
EST: TTACTCTCAATGAGCCCTACGAAACCTTGGTGCCATCGTCGTTGTATCAT GCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCTCTTTGCCEST: gi|213598064|gb|DB972252.1|DB972252
genomic: TTACTCTCAATGAGCCCTACGAAACCTTGGTGCCATCGTCGTTGTATCATgtaagccata ... tttgtttcagGCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCTCTTTGCC
EST: TTACTCTCAATGAGCCCTACGAAACCTTGGTGCCATCGTCGTTGTATCAT GCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCTCTTTGCC
genomic: TTACTCTCAATGAGCCCTACGAAACCTTGGTGCCATCGTCGTTGTATCATgtaagccata ... tttgtttcagGCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCTCTTTGCC
tttaggagaaataaccattgatgatatcttggtttgtttgcttgatttgtttcagGCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCTCTTTGCCCCCTCATTCGTGGATATTAACCGGGCTGTGCAGTTCATTCATC
tttgtttc CT-rich tract
agaaataa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ttctatataagcaaaatagtttcacgatatatttagcctatttgttttaggagaaataaccattgatgatatcttggtttgtttgcttgatttgtttcagGCTCACGGGATTGATCATTTGGTGATTCCCACCAGGGATTATCTCTTTGCCCCCTCATTCGTGGATATTAACCGGGCTGTGCAGTTCATTCATC
- - - - aagcaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - gaaataac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgatgat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgtttgc