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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttggtttgacagttcaaatgatgagttccctgcactttaattatatgactttacaatgaagcaccactacattggcattgtccataattatatttcgcaagtatcttgttcaatactacaaattattccacaagcttgcatgcctttagaaactaaattggcgagatatgtttcagAGGCGGGGATTGGAAAAACGGTGGAAACTGTCATTTGGAAACACTACCGGAGCTTGGATCTTCATTGGTGCCTAATGACAACTGGTCACAATTAAAAATA

Basic information

species Glycine max
transcript GLYMA07G38760.1
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attattccacaagcttgcatgcctttagaaactaaattggcgagatatgtttcagAGGCGGGGATTGGAAAAACGGTGGAAACTGTCATTTGGAAACACTACCGGAGCTTGGATCTTCATTGGTGCCTAATGACAACTGGTCACAATTAAAAATA
                             aactaaa  putative branch site (score: 2)
                       tttagaaactaaatt  TA-rich tract