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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtcttatgctcctatacctaaatcatttgatgcaactgttataaatttttctcatgtaaaatcacacacagcactctccattgacgaaaaggttatgtccatgtggatttatacatatttgttttagatagggtcttttttatgtggatttgactctctcatgaagccattctaaggtctgatccttctaatcctgtagTTTGCATGTAATGCACATACCATTTGTGACAGTGAGTTGAGACCCGTGGGAACAGGATTGTATCCTGTTATTTCCATCATCAATCACAG

Basic information

species Glycine max
transcript GLYMA06G11490.1
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tggatttgactctctcatgaagccattctaaggtctgatccttctaatcctgtagTTTGCATGTAATGCACATACCATTTGTGACAGTGAGTTGAGACCCGTGGGAACAGGATTGTATCCTGTTATTTCCATCATCAATCACAG
                                         ttctaat  putative branch site (score: 2)
                                      tccttcta  CT-rich tract
                        attctaa  TA-rich tract