1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaatactgtgttaaacacttcactctgtatgttaactggattcttgttcattgttgatgttgtctccaaatggtatacagGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGAACCCTCTATGATGGTGAAACTCGACTTTTTTTTCGAAACAGTG
species | Glycine max |
transcript | GLYMA05G33140.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAG GGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGAEST: gi|14258428|gb|BG881336.1|BG881336
genomic: TTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGgtaatactgt ... tggtatacagGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGA
EST: TTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAG GGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGAEST: gi|208192364|gb|GD993740.1|GD993740
genomic: TTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGgtaatactgt ... tggtatacagGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGA
EST: TTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAG GGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGEST: gi|298164571|gb|HO014216.1|HO014216
genomic: TTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGgtaatactgt ... tggtatacagGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGG
EST: TTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAG GGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGAEST: gi|151395988|gb|EV265865.1|EV265865
genomic: TTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGgtaatactgt ... tggtatacagGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGA
EST: TTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAG GGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGA
genomic: TTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGgtaatactgt ... tggtatacagGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaatactgtgttaaacacttcactctgtatgttaactggattcttgttcattgttgatgttgtctccaaatggtatacagGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGAACCCTCTATGATGGTGAAACTCGACTTTTTTTTCGAAACAGTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA