Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tcatttagatgaaggcatcactgatatgaatttggctgttagttaccgaaatatttttccacttgttcatgtttatctgaacaattcataaatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGTTTGGGCCTGGCTTTGAACTTCTCTGTCTTTTATTATGAAATTTTGAACT

Basic information

species Glycine max
transcript GLYMA05G29080.7
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA05G29080.7 (Glycine max), 3'ss of exon 3
lower sequence: Vv10s0003g01240.t01 (Vitis vinifera), 3'ss of exon 3
tcatttagatgaaggcatcactgatat--gaatttggctgttagttaccgaaatatttttccacttgttcatgtttatctgaacaattcataaatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGTTTGGGCCTGGCTTTGAACTTCTCTGTCTTTTATTATGAAATTTTGAACT
|  |       || ||   |  | | |  || ||      ||||||   |  |  ||     | |||   || || |||        | ||     ||||||   ||||| || || || |||||||| ||| |  ||||||||||||| ||  ||||  |||| |||||||||||||| ||||| ||||||||| ||||||
ttgtactatgaaatgctaaatagctctccgagttccagaattagtt-ttgtcaagttgagttatttgaa-atattcatccatttgtgtgattgggtttgcagACAGCTTCTACGACAGCAGAGGCTGATTTATCTCCCACACATCCCATTCGACTGGGTTTGGCCTTGAACTTCTCTGTTTTTTACTATGAAATTATGAACT

upper sequence: GLYMA05G29080.7 (Glycine max), 3'ss of exon 3
lower sequence: PP1S201_25V6.1 (Physcomitrella patens), 3'ss of exon 3
--------------------------------------------------------------------------------------tcatttagatgaaggcatcactgatatgaatttggctgttagttaccgaaatatttttccacttgttcatgtttatctgaacaattca---taaatat---tgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGTTTGGGCCTGGCTTTGAACTTCTCTGTCTTTTATTATGAAATTTTGAACT
                                                                                      |  | ||| |   |        | |         | ||||    |   || |    | |      |   |  | |  |||   |       | ||||    |||||   || || | ||| || | | | || || ||  | || ||||| || ||  |||| ||||| ||||||||||||||||| |||||||| ||||||||||
gtgtgtctacgtgggggtgattgggtgttgtgctgagtaatatagtgagcttgggtggttggcactgcagcttgtggtgataactgttgtctagtttctgtatctggcggtggtggcgcag-tgttgtccaattaagtgggctgcgtggcatgagtagtaacgtgacggaggtgatgtgaatacgtgtgcagGCTGCATCTAATACAGCAGTGACAGACTTGGCGCCAACTCATCCGATTCGGCTGGGACTGGCCTTGAACTTCTCTGTCTTCTATTATGAGATTTTGAACT

upper sequence: GLYMA05G29080.7 (Glycine max), 3'ss of exon 3
lower sequence: PP1S46_127V6.1 (Physcomitrella patens), 3'ss of exon 3
------------------------------------------------------------------------------------------tcatttagatgaaggcatc-actgatatgaatttggctgttagttaccgaaatatttttccacttgttcatgtttatctgaacaattcataaatat---tgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGTTTGGGCCTGGCTTTGAACTTCTCTGTCTTTTATTATGAAATTTTGAACT
                                                                                          | |    ||  |  |  |  |||       | | ||   || ||          | | |   | || | |||     | |||      ||    |    |||||   || ||||  ||||| | | | ||  | ||| | || ||||| |||||  ||||  | |||||||||||||| |||||||||||||||||||||||||
gtatgttcaaagatgagtctcagattgcgctgataatacaaccttcagtggtcatttctggaaatgctgtgataattttcatagagtaactgacagtgacaatcgtgtttactacggcccagtgggtcattcgtcttgagtggttgtcttggcctggtaatgacatacagaaagtcgtatgtgcacgtgtgcagGCTGCATCCAGCACTGCAGTGACGGACCTGGCACCGACGCATCCTATCCGACTGGGATTAGCTTTGAACTTCTCGGTCTTTTATTATGAAATTTTGAACT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208266480|gb|GE063219.1|GE063219
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|254327926|gb|GR834891.1|GR834891
EST:     ATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: ATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|207702007|gb|GD683881.1|GD683881
EST:     GAGGCTGCTGATCATTCCATGAAAGCGTATCAGG                         T
genomic: GAGGCTGCTGATCATTCCATGAAAGCGTATCA-Ggtctgcttgt ... aatattgcag-
EST: gi|207702007|gb|GD683881.1|GD683881
EST:     GAGGCTGCTGATCATTCCATGAAAGCGTATCAGG                         T
genomic: GAGGCTGCTGATCATTCCATGAAAGCGTATCA-Ggtctgcttgt ... aatattgcag-
EST: gi|207702007|gb|GD683881.1|GD683881
EST:     GAGGCTGCTGATCATTCCATGAAAGCGTATCAGG                         T
genomic: GAGGCTGCTGATCATTCCATGAAAGCGTATCA-Ggtctgcttgt ... aatattgcag-
EST: gi|207702007|gb|GD683881.1|GD683881
EST:     GAGGCTGCTGATCATTCCATGAAAGCGTATCAGG                         T
genomic: GAGGCTGCTGATCATTCCATGAAAGCGTATCA-Ggtctgcttgt ... aatattgcag-
EST: gi|4301911|gb|AI443258.1|AI443258
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|254328642|gb|GR833014.1|GR833014
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|207770217|gb|GD742307.1|GD742307
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|254333165|gb|GR850415.1|GR850415
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|10709621|gb|BF009345.1|BF009345
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|254328641|gb|GR833013.1|GR833013
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|298178990|gb|HO024725.1|HO024725
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGA
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGA
EST: gi|5058166|gb|AI736642.1|AI736642
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|193540325|gb|FK494815.1|FK494815
EST:     CCGGTGATGAGAG-AAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|13477504|gb|BG507360.1|BG507360
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|17519552|gb|BM188594.1|BM188594
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|193724885|gb|FK659233.1|FK659233
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|17518586|gb|BM187628.1|BM187628
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|10846261|gb|BF069189.1|BF069189
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|14011311|gb|BG726242.1|BG726242
EST:     CGGTGATGATGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CGGTGATGA-GAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|17022285|gb|BM093319.1|BM093319
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|192309538|gb|FK000970.1|FK000970
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|5666653|gb|AI930689.1|AI930689
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|21889084|gb|BQ742297.1|BQ742297
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|254335227|gb|GR846724.1|GR846724
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|254333164|gb|GR850414.1|GR850414
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|208154066|gb|GD951871.1|GD951871
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGG
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGG
EST: gi|298191378|gb|HO038857.1|HO038857
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|193705946|gb|FK647152.1|FK647152
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCC
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCC
EST: gi|208286315|gb|GE087787.1|GE087787
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|254347253|gb|GR853502.1|GR853502
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|21638441|gb|BM139487.1|BM139487
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|193708168|gb|FK648130.1|FK648130
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|19270324|gb|BM886580.1|BM886580
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATC
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATC
EST: gi|254336492|gb|GR842671.1|GR842671
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|151394632|gb|EV264503.1|EV264503
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|10843848|gb|BF067096.1|BF067096
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         GTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATGCCATACGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|7233997|gb|AW569338.1|AW569338
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|192309537|gb|FK000969.1|FK000969
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|7795822|gb|AW781219.1|AW781219
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|254335228|gb|GR846725.1|GR846725
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCA-TCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|207705808|gb|GD686884.1|GD686884
EST:     GAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: GAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|193572269|gb|FK530014.1|FK530014
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATTCC
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGC-TTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCAT-CC
EST: gi|10231553|gb|BE800441.1|BE800441
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGATAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGG
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|6482683|gb|AW201922.1|AW201922
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGANGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|254336493|gb|GR842672.1|GR842672
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGT
EST: gi|193537717|gb|FK497650.1|FK497650
EST:     CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAG                         TTGGCTTCCACTACTGCCGAGGCTAGAGTTAGCATCCACACATCCCATCCG
genomic: CCGGTGATGAGAGAAAAGAGGCTGCTGATCATTCCATGAAAGCGTATCAGgtctgcttgt ... aatattgcagTTGGCTTCCACTACTGCCGAGGCT-GAGTTAGCATCCACACATCCCATCCG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ccgaaatatttttccacttgttcatgtttatctgaacaattcataaatattgcagTTGGCTTCCACTACTGCCGAGGCTGAGTTAGCATCCACACATCCCATCCGTTTGGGCCTGGCTTTGAACTTCTCTGTCTTTTATTATGAAATTTTGAACT
                                  aacaattcataaatat  TA-rich tract