1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtgtatattttgatgctggtcttgatgcataattttaactgctagtattaacttgttgagatcaaatgataatttggtgcttcatagGAAGGATTTGCCTTCTCACACTGCACAACCTGCAAAGCCCAATTTCATCTTAGAGTTGAATCGTTTGAGGACAACTCTTGGCGTAAAATAAAGTTCAGAC
species | Glycine max |
transcript | GLYMA05G08220.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CCCAACAGTTTGTCCATCGTTCATGTCTTGATCATTGGCGCTCAGTAAAG GAAGGATTTGCCTTCTCACACTGCACAACCTGCAAAGCCCAATTTCATCTTEST: gi|209711926|gb|BW679005.1|BW679005
genomic: CCCAACAGTTTGTCCATCGTTCATGTCTTGATCATTGGCGCTCAGTAAAGgtgtatattt ... tgcttcatagGAAGGATTTGCCTTCTCACACTGCACAACCTGCAAAGCCCAATTTCATCTT
EST: CCCAACAGTTTGTCCATCGTTCATGTCTTGATCATTGGCGCTCAGTAAAG GAAGGATTTGCCTTCTCACACTGCACAACCTGCAAAGCCCAATTTCATCTT
genomic: CCCAACAGTTTGTCCATCGTTCATGTCTTGATCATTGGCGCTCAGTAAAGgtgtatattt ... tgcttcatagGAAGGATTTGCCTTCTCACACTGCACAACCTGCAAAGCCCAATTTCATCTT
ttttaactgctagtattaacttgttgagatcaaatgataatttggtgcttcatagGAAGGATTTGCCTTCTCACACTGCACAACCTGCAAAGCCCAATTTCATCTTAGAGTTGAATCGTTTGAGGACAACTCTTGGCGTAAAATAAAGTTCAGAC
tattaac putative branch site (score: 1)
atcaaatgataattt TA-rich tract