Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tctggtctttgagaattataatatcttttggtaaggtctgtcttagccataattacatcattttgtgcaagcgaattaaaatatctatctattatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGCGGAGTAAAGAAG

Basic information

species Glycine max
transcript GLYMA03G40530.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G40530.1 (Glycine max), 3'ss of exon 3
lower sequence: LOC_Os06g36160.1 (Oryza sativa), 3'ss of exon 2
tctggtctttgagaattataatatcttttggtaaggtctgtcttagccataattacatcattttgtgcaagcgaattaa-aatatctatctattatat-cagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGCGGAGTAAAGAAG
  |  | ||     |||    |    |  |    |  |   |   |   ||  |  |    ||         |||| |  ||| | |   |||| |   ||||| || |||| |||||||||||| |||||| | ||||| ||||||||  | ||||| ||||| |||||||| || || || ||||||
--tattattgattgattcatgtgaaataggaactgcacatgcaccgatgtatgtggagtcattgacatgtttgaatcactaatgttttgttattctccacagAATGGTCTTGCCACTAAGGTAGAGAAGTCACGTAAGCAGATGAAGGAACGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG

upper sequence: GLYMA03G40530.1 (Glycine max), 3'ss of exon 3
lower sequence: Vv14s0030g01620.t01 (Vitis vinifera), 3'ss of exon 3
tctggtctttgagaattataatatc--ttttggtaaggtctgtcttagccataat-----tacatcattttgtgcaagcgaattaaaatatctatctattatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGCGGAGTAAAGAAG
     | |   | ||| |     ||  ||||  |  |  || |  | ||| |  |     |||  |||||| | |  ||  ||| || |  || | |    |  ||||| ||  | || || ||||| || ||||| |||||||||||||||||||| ||||||||  | |||||| | || || |||||||||
---tttttaaaaaaatcacgtcttccttttttctttgaactttaattgccctcctctctctaccccattttcttcttgc--attgaatttgctgtttg--gtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGAAGAATAGGTCCAAGAAGGTCCGAGGTGTAAAGAAG

upper sequence: GLYMA03G40530.1 (Glycine max), 3'ss of exon 3
lower sequence: Vv07s0151g00900.t01 (Vitis vinifera), 3'ss of exon 3
-------tctggtctttgagaattataatatcttttggtaaggtctgtcttagccataattacatcattttgtgcaagcgaattaaaatatctatctattatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGCGGAGTAAAGAAG
       | |   ||| | |||  |  | ||||| |  |  | | | | ||     |    ||||  || | |      ||    |   |  | |||       ||||| ||  | || || ||||| |||||||||||||||||||||||||| || ||||| || || |||||| | || ||||| ||||||
acaacaatgtacacttagtgaacaagga-atcttatctt--gctttattttgctattcgaaacatgcttctctttctctgaccatagcaacttgtctgcg----cagAATGGATTGGATACCAAGGTGGAAAAGTCAAGGAAGCAAATGAAGGAAAGGAAGAACAGGGCCAAGAAGGTCCGAGGAGTGAAGAAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298171253|gb|HO016285.1|HO016285
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298196419|gb|HO041162.1|HO041162
EST:     ACACAGTGGAAAATGCTAAAAGGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGGCACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|27446063|gb|CA953186.1|CA953186
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|27426075|gb|CA937595.1|CA937595
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|254327064|gb|GR836673.1|GR836673
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298180235|gb|HO025450.1|HO025450
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|17963777|gb|BM270522.1|BM270522
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|16282391|gb|BI944991.1|BI944991
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298189696|gb|HO038099.1|HO038099
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|20814204|gb|BQ298682.1|BQ298682
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298175026|gb|HO018021.1|HO018021
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|209713209|gb|BW681744.1|BW681744
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|18711290|gb|BM522586.1|BM522586
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|31561683|gb|CD487521.1|CD487521
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|207765187|gb|GD737238.1|GD737238
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|21601272|gb|BQ611603.1|BQ611603
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|193686005|gb|FK626364.1|FK626364
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|13252193|gb|BG363096.1|BG363096
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|58018209|gb|CX704951.1|CX704951
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|15200415|gb|BI424338.1|BI424338
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|42723081|gb|CK768980.1|CK768980
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298194484|gb|HO042956.1|HO042956
EST:     ACACAGTGGAAAATGCTAAAGAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTTGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|254318387|gb|GR832555.1|GR832555
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192313980|gb|FK007684.1|FK007684
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|58015405|gb|CX702147.1|CX702147
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192318268|gb|FK007242.1|FK007242
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|19453438|gb|BM954848.1|BM954848
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192324648|gb|FK018744.1|FK018744
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|31310136|gb|CD395339.1|CD395339
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|24135556|gb|BU926066.1|BU926066
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|209725964|gb|BW669738.1|BW669738
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298189284|gb|HO037687.1|HO037687
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|5677230|gb|AI938360.1|AI938360
EST:     AGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: AGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298165280|gb|HO011329.1|HO011329
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|8826160|gb|BE209820.1|BE209820
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAATGAAGCAAATGAATGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|6668119|gb|AW279570.1|AW279570
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|38193940|gb|CF923146.1|CF923146
EST:     ACACAATGGANAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|254318388|gb|GR832556.1|GR832556
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|7234101|gb|AW569441.1|AW569441
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|9901139|gb|BE610107.1|BE610107
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298196002|gb|HO044393.1|HO044393
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AATGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298167029|gb|HO010468.1|HO010468
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298170829|gb|HO015805.1|HO015805
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192326516|gb|FK017263.1|FK017263
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|31475254|gb|CD417282.1|CD417282
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCCAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192325307|gb|FK019163.1|FK019163
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192293851|gb|FG986060.1|FG986060
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192321907|gb|FK013257.1|FK013257
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCCTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|31457405|gb|CD399433.1|CD399433
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192313979|gb|FK007683.1|FK007683
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298187566|gb|HO034715.1|HO034715
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|209725963|gb|BW669737.1|BW669737
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|6133919|gb|AW132312.1|AW132312
EST:     ACACATTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192323720|gb|FK016026.1|FK016026
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|7233923|gb|AW569265.1|AW569265
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|17022873|gb|BM093907.1|BM093907
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|38192623|gb|CF921829.1|CF921829
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192331482|gb|FK019927.1|FK019927
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|214006656|gb|DB987538.1|DB987538
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298169027|gb|HO020387.1|HO020387
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|13787351|gb|BG649943.1|BG649943
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|58015724|gb|CX702466.1|CX702466
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|8282867|gb|BE020428.1|BE020428
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCCAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|26057723|gb|CA800637.1|CA800637
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|213602812|gb|DB970531.1|DB970531
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|151398399|gb|EV268270.1|EV268270
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|254330836|gb|GR842101.1|GR842101
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192321906|gb|FK013256.1|FK013256
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCCTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|209713210|gb|BW681745.1|BW681745
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|31309760|gb|CD394963.1|CD394963
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|33388016|gb|CA851223.1|CA851223
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|16348615|gb|BI974210.1|BI974210
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|15661570|gb|BI698941.1|BI698941
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|151396176|gb|EV266053.1|EV266053
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|19268761|gb|BM885017.1|BM885017
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298176975|gb|HO023336.1|HO023336
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|57574155|gb|CX547130.1|CX547130
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|24135628|gb|BU926138.1|BU926138
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|6951630|gb|AW423698.1|AW423698
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCATG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|209703725|gb|BW670688.1|BW670688
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298164178|gb|HO013823.1|HO013823
EST:     ACACGGTGGAAAATGCTTAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298192829|gb|HO033263.1|HO033263
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
EST: gi|193539837|gb|FK493823.1|FK493823
EST:     ACACAGTGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAAT
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAAT
EST: gi|192324998|gb|FK016139.1|FK016139
EST:     ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGG                         AACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA
genomic: ACACAATGGAAAATGCTAAAAAGTATGAGCCCAAATACAGGCTTATCAGGgtgagtcaac ... attatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gccataattacatcattttgtgcaagcgaattaaaatatctatctattatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGCGGAGTAAAGAAG
                            aattaaaatatctatc  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tctggtctttgagaattataatatcttttggtaaggtctgtcttagccataattacatcattttgtgcaagcgaattaaaatatctatctattatatcagAACGGCCTTGACACTAAGGTAGAAAAGTCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGCGGAGTAAAGAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - gtctttg
- - - - - - - - - - - - cttttgg
- - - - - - - - - - - - - - - - - - -ctgtctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgcaagc