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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtcctcttttgcatatcaatggtcatggtatagcagttaatagagcatggacatggtttttagattgataattttccctcttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAACAGGACTTGATTTCTGTGGCTTGTAAACATTCTATATAAGTATTTTCTGG

Basic information

species Glycine max
transcript GLYMA03G35490.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G35490.1 (Glycine max), 3'ss of exon 3
lower sequence: Vv08s0007g03130.t01 (Vitis vinifera), 3'ss of exon 3
----------------------gtgagtcctcttttg-catatcaatggtcatggtatagcagttaatagagcatggacatggtttttagattgataattttccctcttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAACAGGACTTGATTT-CTGTGGCTTGTAAACATTCTATATAA-GTATTTTCTGG
                       | | |  ||| ||   || | | |   |||  |  |   | || |  |    |  ||   ||||   ||||||  |      | |   ||||||| || ||||||||||||||||| |||||||| || ||||| || || | | |||     |    ||    |||||   || |   ||   |||| | |   
gtaggttaatttttcatcttgttttatttttctcttaatattttatttaccatt-tggatatgatactgtaattagctcagccttttgcaattgatg-tcacaattgtacctgcagGTTATTAGAGGAAATAGTGTGGTTACTGTTGAAGCTCTTGAGCCAGTAAGCCGGATGCAGTGAATTGATTTTTGTATCAATGCCTAATGCTGTATCTACA--
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254319446|gb|GR830697.1|GR830697
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|192333496|gb|FK024025.1|FK024025
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|193419481|gb|FK383159.1|FK383159
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|10255304|gb|BE823070.1|BE823070
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|7041610|gb|AW471504.1|AW471504
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|192296352|gb|FG991590.1|FG991590
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|14126515|gb|BG790953.1|BG790953
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCACAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|9901050|gb|BE610018.1|BE610018
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|193418477|gb|FK383891.1|FK383891
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|193657862|gb|FK601497.1|FK601497
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCA
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCA
EST: gi|151409296|gb|EV279104.1|EV279104
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|16347640|gb|BI973235.1|BI973235
EST:     TTTACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|7028229|gb|AW458012.1|AW458012
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|151393472|gb|EV263347.1|EV263347
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|193321395|gb|FK285223.1|FK285223
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTC
EST: gi|26059780|gb|CA802694.1|CA802694
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|207774052|gb|GD745540.1|GD745540
EST:     ACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|208055079|gb|GD851122.1|GD851122
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|193618685|gb|FK566733.1|FK566733
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|208168402|gb|GD966922.1|GD966922
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|193658817|gb|FK602026.1|FK602026
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|19268867|gb|BM885123.1|BM885123
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|213618034|gb|DB963667.1|DB963667
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|151407352|gb|EV277167.1|EV277167
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|31468284|gb|CD410312.1|CD410312
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|192309180|gb|FG999099.1|FG999099
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|192333495|gb|FK024024.1|FK024024
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|14258516|gb|BG881424.1|BG881424
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|14990669|gb|BI316342.1|BI316342
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|19269146|gb|BM885402.1|BM885402
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|208319047|gb|GE112494.1|GE112494
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|192328013|gb|FK021759.1|FK021759
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|151404612|gb|EV274426.1|EV274426
EST:     ACAATACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|10252902|gb|BE820668.1|BE820668
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|151409574|gb|EV279382.1|EV279382
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTAGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|213593675|gb|DB971697.1|DB971697
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|31467272|gb|CD409300.1|CD409300
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|207800148|gb|GD771121.1|GD771121
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|193352117|gb|FK317616.1|FK317616
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|298184568|gb|HO029781.1|HO029781
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|19269379|gb|BM885635.1|BM885635
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|193572056|gb|FK529605.1|FK529605
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|298177502|gb|HO023635.1|HO023635
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTCGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
EST: gi|19053330|gb|BM731997.1|BM731997
EST:     ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTG                         GTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC
genomic: ACAACACTGTGGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGgtgagtcctc ... cttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAAC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agttaatagagcatggacatggtttttagattgataattttccctcttattgcagGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCGCTTGAACCTGTGAACAGGACTTGATTTCTGTGGCTTGTAAACATTCTATATAAGTATTTTCTGG
                            gattgat  putative branch site (score: 4)
                                     ttttccctcttattgc  putative PPT
                      tttttagattgataat  TA-rich tract