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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...attggttgtttgtgtgcatgtcatgtgtaggacattgcttagtaatactgcaatggttgcatgcatttgaattgattgtttgtgtgcatgtcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCCACTCTGGAAGTTATCCAGAAAAAGA

Basic information

species Glycine max
transcript GLYMA03G34700.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA03G34700.1 (Glycine max), 3'ss of exon 3
lower sequence: LOC_Os01g59990.1 (Oryza sativa), 3'ss of exon 4
attggttgtttgtgtgcatgtcatgtgtaggacattgcttagtaatactgcaatggttgcatgcatttgaattgattgttt---gtgtgcatgtcatg-tgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCCACTCTGGAAGTTATCCAGAAAAAGA
      ||    | | |  ||  | || || | | ||  | | | | ||||  |   | |||||  |||     ||| ||     | |  | ||     |||||||||||  |   |||||||| ||||||||| | ||| |  |||| ||||| |||||  |||| ||||||||||| || |||||||||||||| || ||||
--catgtgcagttatccgagttttctgcagca-actggctggaattgctgccttatat-catgcccttgctgctatttttctgaatttcaacgttgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCATACTCACGGTCAATTGTTGGTGCTACACTGGAAGTTATCCAAAAGAAGA

upper sequence: GLYMA03G34700.1 (Glycine max), 3'ss of exon 3
lower sequence: LOC_Os05g40820.3 (Oryza sativa), 3'ss of exon 4
---attggttgtttgtgtgcatgtcatgtgtaggacattgcttagtaatactgcaatggttgcatgcatttgaattgattgtttgtgtgcatgtcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCCACTCTGGAAGTTATCCAGAAAAAGA
    |   ||  |||| |  ||||   ||     |   |   || |  | | |    | |    |   |||  |    ||     | | | |||  | | ||||| ||   |   |||||||| ||||||||| | ||| |  |||| ||||| ||||||||||| |||||||||||  |  ||||||| ||||| || ||||
atgctcaattccttgtatatatgtacagttagtcatgctatgtattgcttccgatcagataaattctgtttacaccctttcccaattttc-tgt--tttttagGATATCCATGCTGAAGCTGTCAAGAAGAGGCGCCGCACCACCAAGAAGCCATACTCTAGGTCAATTGTTGGTGCTTCGTTGGAAGTCATCCAAAAGAAGA

upper sequence: GLYMA03G34700.1 (Glycine max), 3'ss of exon 3
lower sequence: GRMZM2G074898_T03 (Zea mays), 3'ss of exon 4
---attggttgtttgtgtgcatgtcatgtgtaggacattgcttagtaatactgc-aatggttgcatgcatttgaa-ttgattgtttgtgtgcatgtcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCCACTCTGGAAGTTATCCAGAAAAAGA
   | | |  | |||     |     ||| |  | |||    ||  |||  ||| |   ||     || | |||  || | ||| | ||| ||| |  | ||||||||||   |   |||||||| ||||||||| | |||||  |||| ||||| ||||| ||||||||||| |||||  |  ||||||| |||||||| ||||
ccaactagacgattgcaacaacaat-tgtttctgccatg--ctaacaatggtgctagaagtctagagcctctgatcttaaatgtatttgt-cat-ttgtctgtagGACATCCATGCTGAAGCTGTCAAGAAGAGGCGCCGCGCCACCAAGAAGCCATACTCGAGGTCCATTGTGGGTGCTTCCTTGGAAGTGATCCAGAAGAAGA

upper sequence: GLYMA03G34700.1 (Glycine max), 3'ss of exon 3
lower sequence: AT3G53020.1 (Arabidopsis thaliana), 3'ss of exon 3
--------attggttgtttgtgtgcatgtcatgtgtaggacattgcttagtaatactgcaatggttgcatgcatttgaattgattgtttgtgtgcatgtcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCCACTCTGGAAGTTATCCAGAAAAAGA
        |    |   |  | || || |  | ||| |    |  ||| ||  |  | || || |       |||||     ||| |     |   | || | | |||||    || ||||| ||||||||||  |||||||| ||  |||| ||||| ||||| ||||||||||||||||| ||  ||||||| || ||||| ||||
gtaaaaaaaaaactcagtaatttggatctgttttgttgtttgt-actttgttttttttcattgatcctg---atttgttaacattctaaaactctgtttcttttatagGATGCAGCACAAGAGGCTGTGAAGAGAAGGAGACGTGCCACCAAGAAGCCATACTCAAGGTCCATTGTTGGTGCTACCTTGGAAGTAATTCAGAAGAAGA

upper sequence: GLYMA03G34700.1 (Glycine max), 3'ss of exon 3
lower sequence: AT2G36620.1 (Arabidopsis thaliana), 3'ss of exon 3
--attggttgtttgtgtgcatgtcatgtgtaggacattgcttagtaatactgcaatggttgcatgcatttgaattgattgtttgtgtgcatgtcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCCACTCTGGAAGTTATCCAGAAAAAGA
  | || || ||| | |   ||     |||    |||   |||||| || || |||           | ||   ||||  ||||| | |        |  |||||   || ||||| ||||||||||  |||||||| ||  | || ||||||||||| ||||| ||||| ||||| ||| |||| ||||| ||||| ||| 
gtaatgtttctttttttagttgcttcttgtttt-catgatttagtactattg-aat-----------tctgttgtgatc-tttgttttctctcttcttacagGACGCAGCACAAGAGGCTGTGAAGAGAAGGAGACGTGCAACTAAGAAGCCTTACTCAAGGTCGATTGTCGGTGCTACTTTGGAGGTTATTCAGAAGAAGC

upper sequence: GLYMA03G34700.1 (Glycine max), 3'ss of exon 3
lower sequence: Vv08s0007g04210.t01 (Vitis vinifera), 3'ss of exon 3
--attggttgtttgtgtgcatgtcatgtgtaggacattgcttagtaatactgcaatggttgcatgcatttgaattgattgtttgtgtgcatgtcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCCACTCTGGAAGTTATCCAGAAAAAGA
    |   |||||  ||   | ||  |   || | ||    ||   ||  ||   || | | |   |||||  |||| |   |   ||  | | |||   |||| ||||||||||| ||||| ||||||||| | || ||  |||||||||| ||||||||||||||||| ||||| ||  |||| ||||||||||| |  |
tgtatatgtgttttggtcactttctggaaaagaatatccactatggattatgtt-tgttgggagttatttgttttgagtcactaattgggt-taatgctcagGATATTGCTCAAGAGGCTGTAAAGAAGAGGCGTCGTGCCACCAAAAAGCCCTACTCTAGGTCCATTGTGGGTGCTACATTGGAGGTTATCCAGAAGAGAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298195186|gb|HO043714.1|HO043714
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|192294484|gb|FG987413.1|FG987413
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298185863|gb|HO031024.1|HO031024
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAATAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|207766477|gb|GD738749.1|GD738749
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCC
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAG-AAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCC
EST: gi|192330294|gb|FK019859.1|FK019859
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|4289428|gb|AI441474.1|AI441474
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193663923|gb|FK612887.1|FK612887
EST:     TCACCTGGACTGCTATGTACAGAAAGCAACAC-AAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: TCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193501135|gb|FK465072.1|FK465072
EST:     AGCCCTCAAAGCTCACCAGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|208065602|gb|GD862503.1|GD862503
EST:     CCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: CCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193619543|gb|FK572153.1|FK572153
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTG
EST: gi|298163305|gb|HO012038.1|HO012038
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACGAAAGG                         GACATTGCTCAAGAAGCTGTGAAGAAGGGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298195882|gb|HO044273.1|HO044273
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298181652|gb|HO025827.1|HO025827
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193695729|gb|FK636035.1|FK636035
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|5126965|gb|AI748701.1|AI748701
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298196757|gb|HO041500.1|HO041500
EST:     AGCCCTCAAAGCTCACCTGGGCTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|163923445|gb|EH039711.1|EH039711
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|209718215|gb|BW657834.1|BW657834
EST:     ATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: ATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|9203789|gb|BE330013.1|BE330013
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|209725094|gb|BW663047.1|BW663047
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|208198213|gb|GD996830.1|GD996830
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298176841|gb|HO023314.1|HO023314
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|14990677|gb|BI316350.1|BI316350
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|151408760|gb|EV278568.1|EV278568
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|208145762|gb|GD943135.1|GD943135
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAA-G                         GACATTGCTCAAGAAG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAG
EST: gi|193682324|gb|FK624136.1|FK624136
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAG
EST: gi|207816587|gb|GD787456.1|GD787456
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298185788|gb|HO028099.1|HO028099
EST:     GGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCGAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|208116457|gb|GD914516.1|GD914516
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAG
EST: gi|208030119|gb|GD831601.1|GD831601
EST:     AGCCCTCAAAGCTCACCTGGACTGCTACGTACAGAAAGCAACACAAAA-G                         GACATTGCTCAAGAA
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAA
EST: gi|208261973|gb|GE058340.1|GE058340
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAG
EST: gi|41146505|gb|CK606716.1|CK606716
EST:     AAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCCGCCAAAAAGCCT
genomic: AAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298191584|gb|HO039063.1|HO039063
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|7147074|gb|AW508996.1|AW508996
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|41145399|gb|CK605610.1|CK605610
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193430097|gb|FK395983.1|FK395983
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAG
EST: gi|193358825|gb|FK327943.1|FK327943
EST:     TATGTACAGTAAAGCAACAC-AAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCC-AAAAGCCT
genomic: TATGTACAG-AAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298192677|gb|HO033111.1|HO033111
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193423764|gb|FK388535.1|FK388535
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTAGCTCAAGAAG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATT-GCTCAAGAAG
EST: gi|298188287|gb|HO034980.1|HO034980
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAGAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|207712421|gb|GD693829.1|GD693829
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACG
EST: gi|13481763|gb|BG511106.1|BG511106
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|207777264|gb|GD750445.1|GD750445
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAG
EST: gi|298194362|gb|HO041010.1|HO041010
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298185667|gb|HO030880.1|HO030880
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298184248|gb|HO029461.1|HO029461
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|209725095|gb|BW663048.1|BW663048
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193604255|gb|FK558562.1|FK558562
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298190439|gb|HO032560.1|HO032560
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAACAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCCGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193532726|gb|FK493232.1|FK493232
EST:     AGCCCTCAAAGCTCACCAGGACTGCTATGTACAGAAAGCAACACAAAA-G                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|207848363|gb|GD819738.1|GD819738
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298195744|gb|HO044135.1|HO044135
EST:     AGCCCTCATAGCCCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCTAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|208192920|gb|GD991133.1|GD991133
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|209718579|gb|BW674718.1|BW674718
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|21676137|gb|BQ628488.1|BQ628488
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298168643|gb|HO009573.1|HO009573
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|209718214|gb|BW657833.1|BW657833
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193547827|gb|FK505108.1|FK505108
EST:     CCTCAAAGCTCACCTAGGTACTTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: CCTCAAAGCTCACCT-GG-AC-TGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|209726489|gb|BW658069.1|BW658069
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193498097|gb|FK463793.1|FK463793
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|192297539|gb|FG989890.1|FG989890
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|254328517|gb|GR835482.1|GR835482
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298169990|gb|HO018614.1|HO018614
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAT                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298168298|gb|HO014473.1|HO014473
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|298175854|gb|HO015259.1|HO015259
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|208274668|gb|GE068454.1|GE068454
EST:     GGACTGCTATGTACAGGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: GGACTGCTATGTACA-GAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|254326840|gb|GR836449.1|GR836449
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|38193078|gb|CF922284.1|CF922284
EST:     AGTCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193616043|gb|FK571917.1|FK571917
EST:     AGCCCTCAAAGCTCACCAGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193419796|gb|FK382424.1|FK382424
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAGCACAAAA-G                         G-CATTGCTCAAG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAG
EST: gi|193407347|gb|FK371462.1|FK371462
EST:     TGTACAGAAAGTAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: TGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|193405172|gb|FK372563.1|FK372563
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGT
EST: gi|298195566|gb|HO043957.1|HO043957
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|208245666|gb|GE047030.1|GE047030
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAG
EST: gi|15813205|gb|BI785480.1|BI785480
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
EST: gi|208296532|gb|GE089688.1|GE089688
EST:     AGCCTTCAAAGCTCACCTGGACTGCAATGTACAGAAAGCAACACAAAA-G                         GACATTGCTCAAG
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAG
EST: gi|298171001|gb|HO016033.1|HO016033
EST:     AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAG                         GACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT
genomic: AGCCCTCAAAGCTCACCTGGACTGCTATGTACAGAAAGCAACACAAAAAGgtgattattt ... tcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tactgcaatggttgcatgcatttgaattgattgtttgtgtgcatgtcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCCACTCTGGAAGTTATCCAGAAAAAGA
                        aattgat  putative branch site (score: 4)
                   atttgaatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
attggttgtttgtgtgcatgtcatgtgtaggacattgcttagtaatactgcaatggttgcatgcatttgaattgattgtttgtgtgcatgtcatgtgtagGACATTGCTCAAGAAGCTGTGAAGAAGAGGAGACGCGCTGCCAAAAAGCCTTACTCTAGGTCCATTGTTGGTGCCACTCTGGAAGTTATCCAGAAAAAGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAAG
- - - tgtttgt
- - - - - tgtgtgc
- - - - - - - -gcatgtc
- - - - - - - - - - - - gtgtagg
- - - - - - - - - - - - - - - - - -tgcttag
- - - - - - - - - - - - - - - - - - - - - - -tactgca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - gcatgca