1 5' 3' | 2 5' 3' | 3 5' 3' |
gtattgtatattatttgactgtcactaaaatgtttatcagaagttaattatgttcaggttgactgttatcaagggatatctggttctcaaagttttgattttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCGTGGGCGTTAAGTTGCACATCACAAAATTTGTGGCATTTGCTTGTACCT
species | Glycine max |
transcript | GLYMA03G30880.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|298174427|gb|HO014572.1|HO014572
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCTGCCGTGGTCEST: gi|207712851|gb|GD693909.1|GD693909
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: AGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|9900352|gb|BE609320.1|BE609320
genomic: AGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGNGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|13480558|gb|BG509901.1|BG509901
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAAATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|31473802|gb|CD415830.1|CD415830
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|254323967|gb|GR836199.1|GR836199
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|12773904|gb|BG238831.1|BG238831
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAAGCTCCTAAGATCAAGCCTTAGAAGCCTACTGCTG GGAAGCCTTTGGGAAGAAGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|193646164|gb|FK589599.1|FK589599
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|8827595|gb|BE211325.1|BE211325
genomic: TTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|8826472|gb|BE210202.1|BE210202
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|4437132|gb|AI522997.1|AI522997
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|9900496|gb|BE609464.1|BE609464
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAANAAGCCAACTTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTEST: gi|298198717|gb|HO042080.1|HO042080
genomic: TTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAAC-TGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGT
EST: TTTACTGGTTGAGGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|27424994|gb|CA936514.1|CA936514
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|298193977|gb|HO040625.1|HO040625
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|15285034|gb|BI468925.1|BI468925
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|254334206|gb|GR849124.1|GR849124
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|7925936|gb|AW831962.1|AW831962
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|19269395|gb|BM885651.1|BM885651
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|254323968|gb|GR836200.1|GR836200
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|193493026|gb|FK460000.1|FK460000
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|6846635|gb|AW348925.1|AW348925
genomic: TAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|15815172|gb|BI787447.1|BI787447
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|254334205|gb|GR849123.1|GR849123
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|298186306|gb|HO036939.1|HO036939
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|31468972|gb|CD411000.1|CD411000
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|298172347|gb|HO019387.1|HO019387
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCEST: gi|6482740|gb|AW201964.1|AW201964
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCEST: gi|31473716|gb|CD415744.1|CD415744
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGC
EST: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTG GGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
genomic: TTTACTGGTTGAAGAGGCTCCTAAGATCAAGCCTAAGAAGCCAACTGCTGgtattgtata ... ttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTC
aggttgactgttatcaagggatatctggttctcaaagttttgattttatttgcagGGAAGCCTTTGGGAAGAGGGCGGGGGCGAGGACGTGGACGCGGCCGTGGTCGTGGGCGTTAAGTTGCACATCACAAAATTTGTGGCATTTGCTTGTACCT
ttttgat putative branch site (score: 4)
ttttattt CT-rich tract
aaagttttgattttat TA-rich tract