Sequence
atgc intronic sequence ATGC exonic sequencegtttatctcactctcattgatttttttttttctttcaattttgctttctttttttctcagtattgtgtcttttgcagTCTTATGCAGTAGACCTGAACATGTCAGCAATTTTGTGGATGCCGAGTCCTTCTTTGGCCCG
Basic information
| species | Glycine max |
| transcript | GLYMA02G06350.2 |
| intron # | 3 |
| splice site | 3' |
| intron type | U2 |
Orthologous splice sites
atgc intronic sequence ATGC exonic sequence
upper sequence: GLYMA02G06350.2 (Glycine max), 3'ss of exon 3
lower sequence: Vv04s0023g01770.t01 (Vitis vinifera), 3'ss of exon 2
--------------gtttatctcactctcattgatttttt--tttttctttcaattttgctttctttttttctcagtattgtgtcttt-------tgcagTCTTATGCAGTAGACCTGAACATGTCAGCAATTTTGTGGATGCCGAGTCCTTCTTTGGCCCG
||| || ||| || | || | || || | | || ||| | | ||| | | || ||| ||| | ||||||||||||||||| |||| | ||||||||||||||||| || || || | ||||| |||
tgctttggctttgatttttcctttttcttttttaattatcaattactcctgaagacttccttacctcatttgttcttcttttgtttttaattctatacagTCTTATGCAGTAGAGCTGAGAACGTCAGCAATTTTGTGGAGGCGGATTCGGTTTTTGGTCCGMapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|193416685|gb|FK383245.1|FK383245EST: TCCGTGGAGAAGCAGCATGATGCTATTCGCAATGTGTTTTCAG TCTTATGCAGTAGACCTGAACATGTCAGCAATTTTGTGGATGCCGAGTCCT
genomic: TCTGTGGAGAAGCAGCATGATGCTATTCGCAATGTGTTTTCAGgtttatctca ... tcttttgcagTCTTATGCAGTAGACCTGAACATGTCAGCAATTTTGTGGATGCCGAGTCCT
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.tttttttttctttcaattttgctttctttttttctcagtattgtgtcttttgcagTCTTATGCAGTAGACCTGAACATGTCAGCAATTTTGTGGATGCCGAGTCCTTCTTTGGCCCG
tgtctttt CT-rich tract
ttttctttcaatttt TA-rich tract
