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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ctaacctatctgtgattaaactttatgttgtccgttattctcttgtgcgcatatggtttctcctgtttgcccctaaactttgattgctcaaaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG

Basic information

species Glycine max
transcript GLYMA01G45060.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 3
lower sequence: GRMZM2G059624_T01 (Zea mays), 3'ss of exon 2
-----------------ctaacctatctgtgattaaactttatgttgtccgttattctcttgtgcgcatatggtttctcctgt-ttgcccctaaactttgattgctcaa--aatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG
                 |||  |  |||    |  |||| ||  |    | ||      |||| |    | | ||  | || | ||     | ||||    || |      | || ||| ||||||| |||||||||||| ||||| ||||| |||||||||||  |||| || | ||| |||||||||||||| || ||| | ||||| ||||||    
gtacgtccgttccttcgctacacattcttgtttctaactatagatctagcattgagtatttgtacatgca-gtttgattctatattataatttaactagctttccctgtccattgtGCAATTTGGTTTTATTGTCTTGACCACCTCGGCTGGCATCATGGATCACAAAGAAGCCACGAGGAAGAATGTTGGTGGAAATGTGCTAGGTTTTTTCTAC----

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 3
lower sequence: AT2G39590.1 (Arabidopsis thaliana), 3'ss of exon 2
--------ctaacctatctgtgattaaac---tttatgttgtccgttattctcttgtgcgcatatggtttctcctgtttgcccc--taaactttgattgctcaaaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG
        ||||||  ||| | ||| ||    | | ||    |  ||  |   || |  |  | || |   |   |  |   |    ||| | ||  | | |||| || ||||||||| || |||||| ||||||| || ||||| |||||||| ||||||||||||||||  || |||||||| || |||||| | ||||| ||||||||| 
gtaaaaaactaaccattcttttatttaataaatctctgagaccaattcatggtttat-tgtgtttgatcattgtgggatattctaacaaagtatgtgtac-caaattgagcagTTTGGGTACATTGTCCTGACAACATCAGCTGGAATCATGGACCATGAAGAGGCTAGGAAGAAAAATGTTGGGGGCAAAGTGCTTGGTTTTTTCTACTAG-

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 3
lower sequence: Vv08s0040g02460.t01 (Vitis vinifera), 3'ss of exon 3
-----------------------------ctaacctatctgtgattaaactttatgttg--tccgttattctcttgtgcgcatatggtttctcct---gtttgcccctaaactttgattgctcaaa---atgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG
                              |||   |      | | | ||| |   ||     |  |  ||     | ||  ||  ||  || |   || ||           ||| |  | |     ||  ||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||  | |||||||| |||||| 
gttggcatccaaaacccactattttttttataaaaaaaaaaaaaatgatcttaaaaatgaacttggcaaactgcaaggggccaatcattattctttgagtatgatttcttggggtgactaatgagtgctatttgcagTTTGGATATATTGTCTTGACAACTTCTGCTGGCATCATGGATCATGAAGAAGCTAGGAGAAAAAATGTTGGTGGCAAAGTTCTTGGTTTCTTTTACTAGT

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 3
lower sequence: Vv13s0019g00530.t01 (Vitis vinifera), 3'ss of exon 4
---ctaacctatctgtgattaaactttatgttgtccgttattctcttgtg-cgcatatggtttctcctgtttgcccctaaactttgattgctcaaaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG
    | | ||   |   | |  | |  | | |     |  ||  |         || |||||||   || |  ||  | |    |||| |  |||||   ||||||||| || |||||  |||| || || ||||| |||||||||||||| |||||||||||||||||||||||||| |||||| | ||||||||||||||||
tattttagctgcatactagtgtattacaggctagatttcctttgccaacaatatatgtggtttcatttgatgacctttga----tgatggtccaaaaattgcagTTTGGATACATTGTGCTGACTACTTCGGCTGGCATCATGGATCATGAGGAGGCTAGGAGAAAGAATGTTGGTGGCAAAGTGCTTGGTTTCTTCTACTAGG

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 3
lower sequence: PP1S115_101V6.1 (Physcomitrella patens), 3'ss of exon 2
--ctaacctatctgtgat-taaactttatgttgtccgttattctcttgtgcgcatatggtttctcctgtttgcccctaaactttgattgctcaaaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG
   |||  |  | ||  | |      | |  |      ||||  |||   | | || ||| |    || || |          || | | |     |  | ||||||| || ||||| |||||||| |||||||| || ||||| || || ||||| ||||||||||| || || || || ||  | |||||||| ||||   
acttaagttgacagtagtgtggggaatttcgtagtgagtattgcctttgactcttagggtat---ttggttccattctgctgatgctcgtttcttgtttgtagTTTGGATACATTGTTTTGACAACATCTGCTGGAATTATGGACCACGACGAGGCCAGGAGAAAGAACGTAGGAGGAAAGGTTCTTGGTTTCTTTTACTGAT

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 3
lower sequence: PP1S426_18V6.1 (Physcomitrella patens), 3'ss of exon 2
ctaacctatctgtgat-taaactttatgttgtccgttattctcttgtgcgcatatggtttct-----cctgtttgcccctaaactt-tgattgctcaaaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG
     || | | ||   |  || ||||  | |  |  |        ||  |  | |  ||       | | | | | | |  |||| |||||  |        |||||| ||||| ||||| ||||| ||||| |||||||| |||||||| || ||||| ||| | ||||| || || || |||||  ||||||||||||| |  |
----tctgtatttggcattcacattattgtcttggcaacaagtcaatgaacccacgaattggaagagcatatcttctcatggacttgtgatttttttggg---gcagTTCGGTTACATTGTATTGACGACCTCAGCTGGTATTATGGATCACGATGAGGCCAGGCGTAAGAACGTAGGAGGCAAAGTCCTGGGTTTCTTCTATTGAG

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 3
lower sequence: PP1S1_304V6.1 (Physcomitrella patens), 3'ss of exon 2
------------ctaacctatctgtgattaaactttatgttgtccgttattctcttgtgcgcatatggtttctcctgtttgcccctaaactttgattgctcaaaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG
             ||| |  ||    |    | || |||||  ||| |  | |   ||  | |  ||   |||  |  |||     |   ||| ||   |     |  ||||||||| || ||||| ||||| ||||| ||||| |||||||| || || |||||||| || ||||||||||| || || ||  | |||||||| ||||  |
aacgatcaagcgttaatcc-tcctcaagaggatttcatgtta-ccgctgcttttaggtatgaacctgaaatctgattgttg-----agtttttcatcttt-----tttgcagTTTGGATACATTGTTTTGACCACCTCAGCTGGCATCATGGACCACGACGAGGCTAGAAGGAAGAATGTTGGAGGAAAGGTCCTTGGTTTCTTTTACTGAG

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 3
lower sequence: PP1S45_88V6.1 (Physcomitrella patens), 3'ss of exon 2
ctaacctatctgtgattaaactttatgttgtccgttattctcttgtgcgcatatggtttctcctgtttgcccc-taaactt--tgatt-gctcaaaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG
      | |||    ||   | |    ||     |    ||  | |   ||      |   || ||  |||   |  ||||  || || | |      | |||||||||||| |||||  ||||||| || ||||| || |||||||| || ||||| ||| ||||||| || || || || ||  | || ||||| ||||  |
---gtttctctactcttccgcatcgctttcaaaatatagcttctattt-caagaaaataaacccgtaagccgtatcgacttgttgttttggttttgtggtgcagTTTGGTTACATTGTGATGACAACGTCAGCTGGCATTATGGATCACGATGAGGCCAGGCGAAAGAACGTAGGAGGCAAGGTCCTTGGCTTCTTTTACTGAG

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 3
lower sequence: EFJ14550 (Selaginella moellendorffii), 3'ss of exon 2
ctaacctatctgtgattaaactttatgttgtccgttattctcttgtgcgcatatggtttctcctgtttgcccctaaactttgattgctcaaaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG
               ||  | |||  |       |   |  |||| | ||| | |   |  |   |||  |    | || ||  |            ||||||||||| |||||  ||||||| ||  | |||||||||||||| || || || ||||| |||||||||||||| || ||  | || |||||||| |   
--------------gtttgattttgagagacgaatcgatggcttg-gtgcaaa-gaagtaacgattttctcttcgatctctggct------------cagTTTGGTTACATTGTGCTGACAACATCGTCCGGTATCATGGATCACGACGAAGCGAGGAGGAAGAATGTTGGTGGCAAGGTCCTCGGCTTCTTCTATTGAT

upper sequence: GLYMA01G45060.1 (Glycine max), 3'ss of exon 3
lower sequence: EFJ26253 (Selaginella moellendorffii), 3'ss of exon 2
ctaacctatctgtgattaaactttatgttgtccgttattctcttgtgcgcatatggtttctcctgtttgcccctaaactttgattgctcaaaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG
               ||  | |||  |       |   |  |||| | ||| | |   |  |   |||  |    | || ||  |            |||||||| || |||||  ||||||| ||  |||||||||||||||| || || || ||||| |||||||||||||| || ||  | || |||||||| |   
--------------gtttgattttgagagacgaatcgatggcttg-gtgcaaa-gaactaacgattttctcttcgatctctggct------------cagTTTGGCTACATTGTGCTGACAACATCGTCTGGTATCATGGATCACGACGAAGCGAGGAGGAAGAATGTTGGTGGCAAGGTCCTCGGCTTCTTCTATTGAT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208180228|gb|GD977563.1|GD977563
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|12773918|gb|BG238845.1|BG238845
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TNTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193620869|gb|FK571421.1|FK571421
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAA
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAA
EST: gi|4306745|gb|AI443948.1|AI443948
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|207681642|gb|GD662907.1|GD662907
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|21639039|gb|BM140085.1|BM140085
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|7233861|gb|AW569204.1|AW569204
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208023722|gb|GD824654.1|GD824654
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         -TTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208274449|gb|GE070153.1|GE070153
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208261415|gb|GE060857.1|GE060857
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|207774666|gb|GD748030.1|GD748030
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208243183|gb|GE041943.1|GE041943
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|192330019|gb|FK020835.1|FK020835
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|207770035|gb|GD741901.1|GD741901
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|207745719|gb|GD715051.1|GD715051
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208301726|gb|GE098956.1|GE098956
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193303527|gb|FK271629.1|FK271629
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|207708857|gb|GD691519.1|GD691519
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|6846271|gb|AW348561.1|AW348561
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208276132|gb|GE080306.1|GE080306
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193399891|gb|FK370038.1|FK370038
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTC
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTC
EST: gi|213591764|gb|DB973371.1|DB973371
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208328898|gb|GE128012.1|GE128012
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|192334186|gb|FK026567.1|FK026567
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193604771|gb|FK559512.1|FK559512
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208066257|gb|GD864054.1|GD864054
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|209726482|gb|BW662834.1|BW662834
EST:     GCCTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193318737|gb|FK284243.1|FK284243
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208073615|gb|GD869016.1|GD869016
EST:     CCCTCAAGGCAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: CCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|192298113|gb|FG991393.1|FG991393
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193647588|gb|FK587999.1|FK587999
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193675365|gb|FK616453.1|FK616453
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193692939|gb|FK627176.1|FK627176
EST:     TGTCAAAGAGATTGAAGGTTGGAACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: TGTCAAAGAGATTGAAGGTTGG-ACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|207704602|gb|GD685991.1|GD685991
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAGCCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|207740900|gb|GD715846.1|GD715846
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208085221|gb|GD881797.1|GD881797
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTGTCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|207710822|gb|GD690316.1|GD690316
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|209726497|gb|BW662835.1|BW662835
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208133477|gb|GD930444.1|GD930444
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208200923|gb|GD997386.1|GD997386
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193672143|gb|FK617113.1|FK617113
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|31469585|gb|CD411613.1|CD411613
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|213597346|gb|DB977765.1|DB977765
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|7686423|gb|AW757071.1|AW757071
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|192334185|gb|FK026566.1|FK026566
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193549445|gb|FK508820.1|FK508820
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTNAAGACAG                         TTTGGTTATATTGT
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGT
EST: gi|193532728|gb|FK493234.1|FK493234
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193434995|gb|FK403807.1|FK403807
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|207746283|gb|GD719689.1|GD719689
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208267769|gb|GE066832.1|GE066832
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208046378|gb|GD847268.1|GD847268
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208333300|gb|GE132785.1|GE132785
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGT
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGT
EST: gi|193431083|gb|FK396801.1|FK396801
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGT
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGT
EST: gi|213587877|gb|DB959701.1|DB959701
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|31307587|gb|CD392790.1|CD392790
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGCTTATATTGTCTTGACAACCTCTGCTGCTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193578563|gb|FK535249.1|FK535249
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|207778504|gb|GD749333.1|GD749333
EST:     TGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCTAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCAT
genomic: TGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTC-AAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCAT
EST: gi|208148449|gb|GD946775.1|GD946775
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208306914|gb|GE101510.1|GE101510
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGA
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTT-GGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGA
EST: gi|208316883|gb|GE111408.1|GE111408
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|4292212|gb|AI437730.1|AI437730
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|151408384|gb|EV278192.1|EV278192
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|193522132|gb|FK477735.1|FK477735
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|208116878|gb|GD918604.1|GD918604
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAG
EST: gi|10235713|gb|BE804601.1|BE804601
EST:     GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAG                         TTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCAT
genomic: GTGTCAAAGAGATTGAAGGTTGGACTGCAAGACTGCTTCCCTCAAGACAGgtaacatcaa ... aaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCAT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgcgcatatggtttctcctgtttgcccctaaactttgattgctcaaaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG
                            taaacttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ctaacctatctgtgattaaactttatgttgtccgttattctcttgtgcgcatatggtttctcctgtttgcccctaaactttgattgctcaaaatgcgcagTTTGGTTATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAGG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - -atctgtg
- - - - - - - - - - - - -tgttgtc
- - - - - - - - - - - - - - - - - - - - -cttgtgc
- - - - - - - - - - - - - - - - - - - - - - - - gcatatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgattgc