1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' |
gtaattaatgtttctcagtgatatatatatatatatattgcttgttgaatataactttcaagaatgtacaactgtactttcagagagaattagaacttaggaaaatgtaaaaagcacataatgaaatttgacagccataacaattttggatggtggtacagGCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTGGATCGAGTCCGCACCTACTATGAACTATTGAACATGCCATTTGAG
species | Glycine max |
transcript | GLYMA10G35190.1 |
intron # | 25 |
splice site | 3' |
intron type | U2 |
EST: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAG GCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTGEST: gi|26058666|gb|CA801580.1|CA801580
genomic: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAGgtaattaatg ... ggtggtacagGCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTG
EST: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAG GCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTGEST: gi|17963254|gb|BM270005.1|BM270005
genomic: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAGgtaattaatg ... ggtggtacagGCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTG
EST: ATCTTTTTGGCGTTCAACAAATTTGTCGAAATGCTATTGCATTGGAACAG GCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAEST: gi|51342395|gb|CO983470.1|CO983470
genomic: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAGgtaattaatg ... ggtggtacagGCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACA
EST: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAG GCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTGEST: gi|15812288|gb|BI784563.1|BI784563
genomic: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAGgtaattaatg ... ggtggtacagGCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTG
EST: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAG GCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTGEST: gi|51337373|gb|CO981239.1|CO981239
genomic: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAGgtaattaatg ... ggtggtacagGCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTG
EST: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAG GCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTGEST: gi|254340255|gb|GR858380.1|GR858380
genomic: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAGgtaattaatg ... ggtggtacagGCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTG
EST: ATC-TTTTGGTGTTCAGCAAA-TTGTCGAAATGCTA-TGCATTAGAACAG GCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTGEST: gi|254341252|gb|GR854980.1|GR854980
genomic: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAGgtaattaatg ... ggtggtacagGCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTG
EST: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAG GCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTGEST: gi|13789586|gb|BG652177.1|BG652177
genomic: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAGgtaattaatg ... ggtggtacagGCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTG
EST: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAG GCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTG
genomic: ATCTTTTTGGTGTTCAGCAAATTTGTCGAAATGCTATTGCATTAGAACAGgtaattaatg ... ggtggtacagGCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTG
gtaaaaagcacataatgaaatttgacagccataacaattttggatggtggtacagGCATTGGCAGCTATTCCATCCATAAATAGTGAAGCAGTGCAACAGAGATTGGATCGAGTCCGCACCTACTATGAACTATTGAACATGCCATTTGAG
ccataac putative branch site (score: 3)
acataatgaaattt TA-rich tract