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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaactaaattgctatattgaacagtcttgtattatttcttgctcatgtttatttttggctaaaattgatattaagatatgtttgtttttggctgaatgttgatatctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACCCTGAATTCAGCAACAAGGATAAGACACTAGTCTTCCAATTTTCTGTCAA

Basic information

species Glycine max
transcript GLYMA20G23080.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA20G23080.2 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os07g14270.2 (Oryza sativa), 3'ss of exon 2
gtaaactaaattgctatattgaacagtcttgtattatttcttgctcatgtttatttttggctaaaattgatattaagatatgtttgtttttggctgaatgttgatatctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACCCTGAATTCAGCAACAAGGATAAGACACTAGTCTTCCAATTTTCTGTCAA
                                    |   |||   | | | | |     || |    || | ||| | ||| || ||  ||  | | | ||  | |   ||||||||| ||||||  |||||| ||||| |||||||||||||||||  ||||||| |||||||||||||||||||| || || ||  | || || ||||| ||
-----------------------------------gtaaattgg--aagatcaatac-acctcattcagacactaacagatgatttttactgaattatttttcttgt---tgcagGTATCCAAACCTCTGAGGACTACAGGTTCTACGCTATTTCAGCGGAGTACCCAGAATTCAGCAACAAGGATAAAACCCTGGTGCTGCAGTTCTCTGTAAA

upper sequence: GLYMA20G23080.2 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os03g61670.1 (Oryza sativa), 3'ss of exon 2
gtaaactaaattgctatattgaacagtcttgtattatttcttgctcatgtttatttttggctaaaattgatattaagatatgtttgtttttggctgaatgttgatatctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACCCTGAATTCAGCAACAAGGATAAGACACTAGTCTTCCAATTTTCTGTCAA
|| |     || | |  |   | ||  ||  |  | |   ||  || | ||| |||||  ||          || ||  ||||  |   ||       || |  | ||| ||||||||| || ||    ||||| |||||||||||||| ||||| ||  |||||||||| ||||||| |||||| ||||| || ||  | || || || || ||
gtgag---gatcgatgcacacaccacgctgctgatttcgttttttcttctttttttttttctg---------ttcaggcatgtgcgaagttactc---tgct--tctctgtgcagGTATCCAGACGTCAGAGGACTACAGATTCTACGCCATTTCGGCCAAGTACCCTGAGTTCAGCAGCAAGGACAAGACCCTCGTGCTGCAGTTCTCGGTGAA

upper sequence: GLYMA20G23080.2 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G074687_T01 (Zea mays), 3'ss of exon 2
gtaaactaaattgctatattgaacagtcttgtattatttcttgctcatgtttatttttggc-taaaattgatattaagatatgtttgtttttggctgaatgttgatatctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACCCTGAATTCAGCAACAAGGATAAGACACTAGTCTTCCAATTTTCTGTCAA
                                                ||| |||     | | | |   ||  | |  |  |||| ||  |   |   | || || |   ||||||||||||||||   ||||| ||||| ||||| || ||||||||| | ||||||||||||||||||||||||||||| || ||  | || || ||||| ||
------------------------------------------------gttaattcaaaacgtcagaagaatggtgatttcagtttattagttaatacgt-ttcatgt---tgcagGTATTCAAACCTCCGAGGACTACAGGTTCTATGCCATTTCAGCTGAATACCCTGAATTCAGCAACAAGGATAAGACCCTGGTGCTGCAGTTCTCTGTGAA

upper sequence: GLYMA20G23080.2 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G358059_T01 (Zea mays), 3'ss of exon 2
gtaaactaaattgctatattgaacagtcttgtattatttcttgctcatgtttatttttggctaaaattgatattaagatatgtttgtttttggctgaatgttgatatctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACCCTGAATTCAGCAACAAGGATAAGACACTAGTCTTCCAATTTTCTGTCAA
                                          |   ||    |    |    | | | |   ||    | | ||| |   |  || ||      | |   ||||||||||||||||   ||||||||||| ||||| || ||||||||  | |||||||| |||||||||||||||||||| || ||  | || || ||||| ||
------------------------------------------gtaaattccaaaacatcagaagattggtggtttcagtttatttatgagttactcaacacgtttcttgttgcagGTATTCAAACCTCCGAGGATTACAGGTTCTATGCCATTTCAGCCGAATACCCTGAGTTCAGCAACAAGGATAAGACCCTGGTGCTGCAGTTCTCTGTGAA

upper sequence: GLYMA20G23080.2 (Glycine max), 3'ss of exon 2
lower sequence: AT1G09210.1 (Arabidopsis thaliana), 3'ss of exon 2
gtaaactaaattgctatattgaacagtcttgtattatttcttgctcat-gtttatttttggctaaaattgatattaagatatgtttgtttttggctgaatgttgatatctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACCCTGAATTCAGCAACAAGGATAAGACACTAGTCTTCCAATTTTCTGTCAA
            |    ||| | |  ||     | ||  |    ||||  |||||| ||    ||  ||| |  |||      |  ||| |||    | ||    | |||  |||||||| || |||||||| || |||||||||||||| ||||||||| ||| |||||||||||| |||||||| |||||  ||||||||||||| || |||||
------------gtatgattcagccttcagagctaatcacagaatcattatttattgttttacaagcttg-tgctaa------tgcgttgttg--caattgccattgtctg-gcagGTATCCAGACCAGTGAAGACTACAGATTCTACGCCATTTCAGCTGAGTTCCCTGAATTCAGTAACAAGGACAAGACCTTAGTCTTCCAATTCTCAGTCAA

upper sequence: GLYMA20G23080.2 (Glycine max), 3'ss of exon 2
lower sequence: AT1G56340.1 (Arabidopsis thaliana), 3'ss of exon 2
gtaaactaaattgctatattgaacagtcttgtattatttcttgctcatgttt-atttttggctaaaattgatattaagatatgtttgtttttggctgaatgttgatatctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACCCTGAATTCAGCAACAAGGATAAGACACTAGTCTTCCAATTTTCTGTCAA
                                              |||||| ||     |  |  ||    ||| |   ||   | || |    | |||  | |      ||||||||| ||||| || ||||| ||||||||||||||||| |||||| | | |||||| || |||||||||||||||||  ||||||||||||| ||||||||
--------------------------------------------gtatgtttcatgaccagtgatgatgttgattcactgattcatattctcatgtcaattataactctcttgcagGTATCCAAACTAGCGAGGACTACAGATTCTACGCTATATCAGCTGAATTCCCTGAGTTTAGCAACAAGGATAAGACCTTAGTCTTCCAATTCTCTGTCAA

upper sequence: GLYMA20G23080.2 (Glycine max), 3'ss of exon 2
lower sequence: Vv07s0005g01390.t01 (Vitis vinifera), 3'ss of exon 2
----------------------gtaaactaaattgctatattgaacagtcttgtattatttcttgctcatgttta----tttttggctaaaat-tgat-------attaagatatgtttgttt-ttggctgaatgttgatatctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACCCTGAATTCAGCAACAAGGATAAGACACTAGTCTTCCAATTTTCTGTCAA
                      ||      | |  | |    ||| |||  | |   |  |||||||  ||||||    || |    | |  | ||||       |||||||  | |  |  |  |       | |  || |   | |||||||||| || ||||| || || |  ||||| || || |||||| ||| |||||||||||| ||||||||||||||  | || ||||| |||||||| ||
gtatgctatccatcattatactgtctgtacattaacaaagacgaaaagtgctttgagacctcttgcttctgtttaagggttctcatttcaggtgtgattttccttattaagagttttcagactacttatatggtttgaatctgggtccagGTATTCAGACTAGTGAAGACTATAAGTTCTATGCAATCTCAGCTGAGTTCCCTGAATTCAGTAACAAGGATAAGACTTTGGTTTTCCAGTTTTCTGTTAA

upper sequence: GLYMA20G23080.2 (Glycine max), 3'ss of exon 2
lower sequence: Vv14s0060g01290.t01 (Vitis vinifera), 3'ss of exon 2
gtaaactaaattgctatattgaacagtcttgtattatttcttgctcatgtttatttttggctaa-aattgatattaagatatgtttgtttttggctgaatgt--tgatatctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACCCTGAATTCAGCAACAAGGATAAGACACTAGTCTTCCAATTTTCTGTCAA
         |||  | |  |  ||| |||| ||    ||   |   ||||||  || |   ||  ||||   | |  || |||| |   ||    ||| |    || | |  ||  |||||| ||||| |||||||| ||||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||| |||| ||||||||| |||| ||
-------gtattattttcatacacattcttatacctatttggggcaatgtttcattctctttattaatttggactttgaaatgtgtaacttgatttgacttcaatggtctggatatagGTATCCAAACAAGTGAGGACTACAGATTCTATGCTATATCAGCTGAGTACCCTGAATTCAGCAACAAAGATAAGACATTAGTTTTCCAATTTACTGTTAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213600783|gb|DB956217.1|DB956217
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|254332429|gb|GR843906.1|GR843906
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|193449775|gb|FK413450.1|FK413450
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|209719566|gb|BW651018.1|BW651018
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|209711757|gb|BW678939.1|BW678939
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|213613490|gb|DB956948.1|DB956948
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|213587860|gb|DB959684.1|DB959684
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|5770360|gb|AI973534.1|AI973534
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|208318470|gb|GE114157.1|GE114157
EST:     AATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: AATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|193489313|gb|FK455778.1|FK455778
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|208226356|gb|GE023121.1|GE023121
EST:     TGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: TGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|213599236|gb|DB960004.1|DB960004
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|17401784|gb|BM178566.1|BM178566
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|21595442|gb|BQ610481.1|BQ610481
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|6666007|gb|AW277466.1|AW277466
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|7283812|gb|AW596414.1|AW596414
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|17023092|gb|BM094126.1|BM094126
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|24135667|gb|BU926177.1|BU926177
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|24136611|gb|BU927121.1|BU927121
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|7692393|gb|AW760501.1|AW760501
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|208157357|gb|GD955931.1|GD955931
EST:     GGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|6454145|gb|AW184893.1|AW184893
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|213611686|gb|DB969074.1|DB969074
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|208224826|gb|GE027653.1|GE027653
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|9264547|gb|BE352694.1|BE352694
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|18692916|gb|BM521764.1|BM521764
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|208038987|gb|GD832829.1|GD832829
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|254315486|gb|GR825295.1|GR825295
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|14990872|gb|BI316545.1|BI316545
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCATTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|48575042|gb|CO036205.1|CO036205
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTGAGTAC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTAC
EST: gi|254348788|gb|GR852467.1|GR852467
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|15813480|gb|BI785755.1|BI785755
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|209721183|gb|BW659195.1|BW659195
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|18692767|gb|BM521615.1|BM521615
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|209698331|gb|BW678062.1|BW678062
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|15203196|gb|BI425964.1|BI425964
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|10710585|gb|BF010303.1|BF010303
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
EST: gi|213617209|gb|DB965164.1|DB965164
EST:     GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAG                         GTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC
genomic: GGAGTGGAACCACACCTCTGGCCAATGGAATGGAGACGCTAACGACAAAGgtaaactaaa ... atctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctaaaattgatattaagatatgtttgtttttggctgaatgttgatatctatgcagGTATTCAAACCAGTGAGGATTACAGATTCTACGCTATTTCAGCTCAGTACCCTGAATTCAGCAACAAGGATAAGACACTAGTCTTCCAATTTTCTGTCAA
         atattaagatatgttt  TA-rich tract