1 5' 3' | 2 5' 3' | 3 5' 3' |
...ttttatttgttttttaagactaataaaaaaatattgggcttgtaaccaaaaaaaatgcctagctgagcccgagcatatgcccctgctggccgcatggtagAACCGCCACTGGTTGCCACCCTCCATTGCTCAACTTGGGAACCTAGAAATTCTTGATCTCAAAGCATGCCACAATTTGGAAGCATTGCCTAGTGACATTG
species | Glycine max |
transcript | GLYMA18G11590.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
ccaaaaaaaatgcctagctgagcccgagcatatgcccctgctggccgcatggtagAACCGCCACTGGTTGCCACCCTCCATTGCTCAACTTGGGAACCTAGAAATTCTTGATCTCAAAGCATGCCACAATTTGGAAGCATTGCCTAGTGACATTG
aaaaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ttttatttgttttttaagactaataaaaaaatattgggcttgtaaccaaaaaaaatgcctagctgagcccgagcatatgcccctgctggccgcatggtagAACCGCCACTGGTTGCCACCCTCCATTGCTCAACTTGGGAACCTAGAAATTCTTGATCTCAAAGCATGCCACAATTTGGAAGCATTGCCTAGTGACATTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - aaaaaaa
- - - - - - - - - - - - - - - - - - -gcttgta
- - - - - - - - - - - - - - - - - - - - - - - caaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - -aatgcct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cccgagc