1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gttagtttatttagttaataaaccctattcctcttcaattcttccctttctcgggcattttaaccaaatcgtagggtttttgcttctcttgtttgtttcagCGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCTCAACCAATCGCTCGTCACGTTTGGTTTCCCGGCTTCGCTCGATCTCTTC
species | Glycine max |
transcript | GLYMA17G07040.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CCACCTTCTCAATCTTCCTTCACAGCCGG CGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCTEST: gi|209709784|gb|BW674000.1|BW674000
genomic: CCACCTTCTCAATCTTCCTTCACAGCCGGgttagtttat ... tttgtttcagCGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCT
EST: CCACCTTCTCAATCTTCCTTCACAGCCGG CGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCTEST: gi|208175443|gb|GD976838.1|GD976838
genomic: CCACCTTCTCAATCTTCCTTCACAGCCGGgttagtttat ... tttgtttcagCGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCT
EST: CCACCTTCTCAATCTTCCTTCACAGCCGG CGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCTEST: gi|192323206|gb|FK016337.1|FK016337
genomic: CCACCTTCTCAATCTTCCTTCACAGCCGGgttagtttat ... tttgtttcagCGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCT
EST: TTAGGCCACCTTCTCAATCTTCCTTCACAGCCGG CGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCTEST: gi|298168870|gb|HO009800.1|HO009800
genomic: TTAGGCCACCTTCTCAATCTTCCTTCACAGCCGGgttagtttat ... tttgtttcagCGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCT
EST: CCACCTTCTCAATCTTCCTTCACAGCCGG CGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCTEST: gi|207689600|gb|GD671993.1|GD671993
genomic: CCACCTTCTCAATCTTCCTTCACAGCCGGgttagtttat ... tttgtttcagCGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCT
EST: CCACCTTCTCAATCTTCCTTCACAGCCGG CGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCT
genomic: CCACCTTCTCAATCTTCCTTCACAGCCGGgttagtttat ... tttgtttcagCGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCT
tttctcgggcattttaaccaaatcgtagggtttttgcttctcttgtttgtttcagCGACTACACGTTCGCCGATGCGGACAATTTGGAGCATTGCGCTAAGTATCTCAACCAATCGCTCGTCACGTTTGGTTTCCCGGCTTCGCTCGATCTCTTC
ttttaac putative branch site (score: 2)
tttttgcttctcttgt putative PPT
attttaa TA-rich tract