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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagatgaaagaagctaaaattttgttagctgtaatgatgaaagcatgtattaagcctgatgtttttacttataattctctaatagATGGATACTTCTTGGTTGATGAAGTAAAACACGCAAAGTATGTATTCTATTCTATGGCTCAAAGGGGAGTGACCCCTGATGTTCAGTGTTATACTAACAT

Basic information

species Glycine max
transcript GLYMA16G31950.2
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtaatgatgaaagcatgtattaagcctgatgtttttacttataattctctaatagATGGATACTTCTTGGTTGATGAAGTAAAACACGCAAAGTATGTATTCTATTCTATGGCTCAAAGGGGAGTGACCCCTGATGTTCAGTGTTATACTAACAT
                       gcctgat  putative branch site (score: 4)
                                            ttctct  putative PPT
                               tttttacttataattc  TA-rich tract