1 5' 3' | 2 5' 3' | 3 5' 3' |
gtatgaactcaatcatttttattgccttctttgaaaatacattgttttaatttaaccacatggcatgagtttcttattgtgcttttgttttgtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAACCATCCCAGTAACAGGCACTGGCATTAACCCTGCTAGGAGTCTAGGAG
species | Glycine max |
transcript | GLYMA16G27140.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAEST: gi|21677365|gb|BQ629716.1|BQ629716
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAEST: gi|208118597|gb|GD918322.1|GD918322
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAEST: gi|10237489|gb|BE806377.1|BE806377
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: GTTCTCTGCAACTGATCCCCAA-AGGAATGCTACAGATTCTTATGTGCCG GTTTTGGCTCCACTTTCAATTGGCTTTGCTEST: gi|208154696|gb|GD958087.1|GD958087
genomic: GTTCTCTGCAACTGA-CCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCT
EST: TCTCTGCTAACTTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAEST: gi|120533343|gb|EH261476.1|EH261476
genomic: TCTCTGC-AAC-TGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GGTTTGGCTCCCCTTCCAAEST: gi|151410185|gb|EV280000.1|EV280000
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAA
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCAEST: gi|193353871|gb|FK321627.1|FK321627
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCA
EST: TGCAACTGATTCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAEST: gi|209699908|gb|BW652548.1|BW652548
genomic: TGCAACTGA-CCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAEST: gi|13789683|gb|BG652274.1|BG652274
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAEST: gi|208120704|gb|GD917489.1|GD917489
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAEST: gi|151394444|gb|EV264315.1|EV264315
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCGCTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAEST: gi|208053598|gb|GD852671.1|GD852671
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCACGGTTCACTTGGCAEST: gi|10848346|gb|BF070849.1|BF070849
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAEST: gi|193317998|gb|FK283322.1|FK283322
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: TGTTCTCTGCAACTGATCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAEST: gi|209729770|gb|BW658575.1|BW658575
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
EST: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCG GTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
genomic: TGTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGgtatgaactc ... gtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCA
ttaatttaaccacatggcatgagtttcttattgtgcttttgttttgtacttgaagGTTTTGGCTCCACTTCCAATTGGCTTTGCTGTGTTCATGGTTCACTTGGCAACCATCCCAGTAACAGGCACTGGCATTAACCCTGCTAGGAGTCTAGGAG
atttaac putative branch site (score: 3)
tttcttatt TA-rich tract