Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|21677735|gb|BQ630086.1|BQ630086EST: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGA TTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAACATGCTCTA
genomic: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGAgtaagtgtca ... tttattgcagTTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAACATGCTCTA
EST:
gi|192302989|gb|FG997005.1|FG997005EST: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGA TTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAACATGCTCTA
genomic: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGAgtaagtgtca ... tttattgcagTTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAACATGCTCTA
EST:
gi|10232144|gb|BE801032.1|BE801032EST: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGA TTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAACATGCTCTA
genomic: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGAgtaagtgtca ... tttattgcagTTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAACATGCTCTA
EST:
gi|6069768|gb|AW099384.1|AW099384EST: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGA TTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAA
genomic: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGAgtaagtgtca ... tttattgcagTTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAA
EST:
gi|17402168|gb|BM178950.1|BM178950EST: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGA TTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAACATGCTCTA
genomic: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGAgtaagtgtca ... tttattgcagTTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAACATGCTCTA
EST:
gi|10844889|gb|BF068085.1|BF068085EST: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGA TTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAACATGCTCTA
genomic: GCCTTGTAGACAACAACAAACCCATCAAGCTCAAAGACTCCTCCATGAGAgtaagtgtca ... tttattgcagTTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAACATGCTCTA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.ataccacatgttgattgcatatggctgatctacattgattattgatttattgcagTTGGATGATTGGGTTCTTTGCCGGATTTACAAGAAGTCCAAACATGCTCTAACTTCAACAGAGGCATCAATAGGGGTGGGTGAGGTAGATCAAGCAGAGG
tattgat putative branch site (score: 3)
tacattgattattgat TA-rich tract