Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatttgtttgttaatcttcttttttttaataatagctcaatttggttactcttggttcatctgtttttgccttgattgtgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTGTTGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGTCCGCG

Basic information

species Glycine max
transcript GLYMA15G10950.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G10950.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G018228_T04 (Zea mays), 3'ss of exon 2
gtatttgtttgttaatcttcttttttttaataatagctcaatttggttactcttggttcatctgtttttgcct-tgattgtgtttt-ctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTGTTGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGTCCGCG
          ||||  | || |     | ||      |  | ||| ||  |  ||    ||  |    ||  | | |||||  | |  |||| |||||||| ||||| |||||||| ||||| ||||||||||| || || || || ||  ||||||| |||||||| |||||||| |||||||| || ||
----------gttagccctcctcaaccttatgcccatttgaattgcttcattctgagg-atacgcccctgattattattgttctatattagGTTACATTGGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATCGTGGTGGAGCTGAATGGAAGACTGAATAAATGTGGTGTTATTAGCCCACG

upper sequence: GLYMA15G10950.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G083497_T04 (Zea mays), 3'ss of exon 1
gtatttgtttgttaatcttcttttttttaataatagctcaatttggttactcttggttcatctgtttttgccttg-attgtgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTGTTGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGTCCGCG
          |||| |  ||  | |  |      |  |||||| ||   |  |  |   ||  ||   ||  | |   | | || | |||| |||||||| ||||| |||||||| ||||| ||||||||||| || ||||| || ||| |||| || ||||| |||||||| || || ||||| || ||
----------gttagttctcaatctcgtgccc-catttcaatt-ggcagcattccgaggatacgtacctgattagtgctatattat-tagGATACATTGGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATTGTGGTGGAACTGAACGGCAGACTAAACAAATGCGGTGTAATTAGCCCCCG

upper sequence: GLYMA15G10950.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G328578_T01 (Zea mays), 3'ss of exon 2
gtatttgtttgttaatcttcttttttttaataatagctcaatttggttactcttggttcatctgtttttgcct-tgattgtgtttt-ctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTGTTGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGTCCGCG
          ||||  | || |     | ||      |  | ||| ||  |  ||    ||  ||   ||  | | |||||  | |  |||| |||||| | ||||| |||||||| ||||| ||||||||||| || || || || ||  ||||||| |||||||| |||||||| |||||||| || ||
----------gttagccctcctcaaccttatgcccatttgaattgcttcattctgagg-atacgtccctgattattattgttctatattagGCTACATTAGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATCGTGGTGGAGCTGAATGGAAGACTGAATAAATGTGGTGTTATTAGCCCACG

upper sequence: GLYMA15G10950.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G177720_T01 (Zea mays), 3'ss of exon 1
gtatttgtttgttaatcttcttttttttaataatagctcaatttggttactcttggttcatctgtttttgccttgattgtgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTGTTGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGTCCGCG
      ||| | ||    ||    || |     |   |||||      | ||   |  ||| |   |   | ||| |  |||| | |||| |||||||||||||| |||||||||||||| ||| || | || || || || || ||| | || || || |||||||| || || || || || || ||
------gttagctagcactcgaccttatgccc-tgtttcaatgactccattccgaggacatgtccatgatcattg-tgctgttatgtagGCTACATTGGAGAGTTCGAGTACGTTGATGACCACCGATCGGGCAAGATCGTGGTCGAACTCAACGGGAGGCTGAACAAGTGCGGCGTCATCAGCCCTCG

upper sequence: GLYMA15G10950.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv13s0019g00530.t01 (Vitis vinifera), 3'ss of exon 3
------------------------------gtatttgtttgttaatcttcttttttttaataatagctcaatttggt-------tac-tcttggttcatctgtttt--tgccttgattgtgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTGTTGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGTCCGCG
                              || |   |||  |  ||||||||  |||   | |   |   |||| |       ||| | ||  ||||  | ||||  ||  || ||| || | |  ||| |||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||| ||||||| ||||| ||||||||||||||||| ||||| ||
gtactaatcaattcatttgaatttcagattgtttcaattttcttttcttctttacttttgcattgtttttttttgttacctgtgtacatttttattcacgtattttactgattttattttgctctacagGTTACATTGGAGAGTTTGAGTATGTTGATGATCACAGGTCTGGAAAGATTGTTGTTGAACTGAATGGAAGACTAAACAAATGTGGGGTTATCAGTCCCCG

upper sequence: GLYMA15G10950.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv08s0040g02460.t01 (Vitis vinifera), 3'ss of exon 2
-----------------------------------------------gtatttgtttgttaatcttcttttttttaataatagctcaatttggttactc---ttggttcatctgtt----tttgccttgattgtgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTGTTGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGTCCGCG
                                               || | |  |  ||     | |   ||  | ||  ||   || ||  | | |    ||| || || |||     |   |  ||  | ||   |  ||| || || || || |||||||| || |||||||||||| | ||||||||||| |||||  ||||||| ||  ||||||| ||||| || |||||||| ||
gttagtgcatgtagcacctattttatttattctcttcgatttctttcgtttctactgttttgatgtgtcgattcaagtatgagtgaaaattaataatttatattgtttgatgtgtcaacatcatctctgcctttggcctgcagGATATATCGGTGAATTTGAGTATGTAGATGATCACAGATCAGGAAAAATTGTGGTTGAGCTGAATGGAAGGTTGAACAAGTGTGGTGTCATTAGTCCTCG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18717609|gb|BM522967.1|BM522967
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|207689580|gb|GD671973.1|GD671973
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|11414038|gb|BF425978.1|BF425978
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|193368091|gb|FK331657.1|FK331657
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|208084754|gb|GD879272.1|GD879272
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|192315581|gb|FK007409.1|FK007409
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTG-TGATGCAAAAGCATG                         GGTACATTGGAGAGTC-GAGTACGTTGATGATCACAGAGCTGGAAAAA
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAA
EST: gi|208134611|gb|GD932180.1|GD932180
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|208131269|gb|GD931156.1|GD931156
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|193582208|gb|FK535579.1|FK535579
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|192323577|gb|FK016408.1|FK016408
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|193617093|gb|FK571679.1|FK571679
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTAGGAAAAAAT
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCT-GGAAAAA-T
EST: gi|151396894|gb|EV266767.1|EV266767
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|192317203|gb|FK009790.1|FK009790
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|7233553|gb|AW568958.1|AW568958
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|193524961|gb|FK482370.1|FK482370
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGNGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|208208575|gb|GE005911.1|GE005911
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|10845853|gb|BF068889.1|BF068889
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|193509561|gb|FK471141.1|FK471141
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|6719259|gb|AW306906.1|AW306906
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|207795806|gb|GD767293.1|GD767293
EST:     CCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: CCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|7232716|gb|AW568070.1|AW568070
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|9439948|gb|BE440460.1|BE440460
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|208329600|gb|GE127177.1|GE127177
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|207811763|gb|GD786008.1|GD786008
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|6069985|gb|AW099565.1|AW099565
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCCTGGANAAATT
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGC-TGGAAAAATT
EST: gi|7233893|gb|AW569235.1|AW569235
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|193622899|gb|FK572373.1|FK572373
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|10238315|gb|BE807131.1|BE807131
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|10238872|gb|BE807768.1|BE807768
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|207720602|gb|GD703535.1|GD703535
EST:     CCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: CCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|193368754|gb|FK336268.1|FK336268
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
EST: gi|193499631|gb|FK461300.1|FK461300
EST:     GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATG                         GGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG
genomic: GCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGgtatttgttt ... tgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agctcaatttggttactcttggttcatctgtttttgccttgattgtgttttctagGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTGTTGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGTCCGCG
                                    ccttgat  putative branch site (score: 5)
                                             tgttttct  putative PPT
                            tgttttt  TA-rich tract