Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaatgttttgttcctttttattagttttatttttttgagatccttgatttaatgttttgcgccgtgtattgttttcttagtttccagcaatcagattgaattgcctctgttttgaattctagggtttaggggctgtttttataattttgaatttgttttgctttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCTTGCCATCAACGAG

Basic information

species Glycine max
transcript GLYMA15G10220.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G10220.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv10s0003g03130.t01 (Vitis vinifera), 3'ss of exon 2
gtaatgttttgttcctttttattagttttatttttttgagatccttgatttaatgttttgcgccgtgtattgttttcttagtttccagcaatcagattgaattgcctctgttttgaattctagggtttaggggctgtttttataattttgaatttgttttgctttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCTTGCCATCAACGAG
                                                     | | | |       || || | |||   |||  ||  ||    ||  ||||           ||||   ||||| |||       |||  | ||     |||| |||| | | || |||||||||||||||||| || || || || |||||||||||||| |||||||| || ||||| |||
----------------------------------------------------gtatgtgggatatgataatgatgtctggatttgtagttatt--gtttgattggt---------aatt---gggttcagg-------ttttgagttggagttttggtttgatctgaaatagGTATTTTCTGAGGAAGCTTAAGAAAGTCAAGAAGAGCAATGGTCAAGTGCTGGCAATCAATGAG

upper sequence: GLYMA15G10220.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv10s0003g03150.t01 (Vitis vinifera), 3'ss of exon 2
gtaatgttttgttcctttttattagttttatttttttgagatccttgatttaatgttttgcgccgtgtattgttttcttagtttccagcaatcagattgaattgcctctgttttgaattctagggtttaggggctgtttttataattttgaatttgttttgctttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCTTGCCATCAACGAG
                                                                          |   | |  | |   ||| |  |     |   |   | |||  |  | ||   || ||   |  |||  | ||  | ||||| |||| | | || |||||||||||||||||| || || || || |||||||||||||| |||||||| || ||||| |||
-------------------------------------------------------------------------gtatgtgggatacgataatgatctgtggatttgtggttattgtttaattggtaataaggttcgggttttgagttagggatttggtttgatctgaaatagGTATTTTCTGAGGAAGCTTAAGAAAGTCAAGAAGAGCAATGGTCAAGTGCTGGCAATCAATGAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|26045641|gb|CA783167.1|CA783167
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|254336532|gb|GR842711.1|GR842711
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|31463848|gb|CD405876.1|CD405876
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|209728866|gb|BW666863.1|BW666863
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|7286164|gb|AW598651.1|AW598651
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|151397783|gb|EV267656.1|EV267656
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|42722678|gb|CK768577.1|CK768577
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298167538|gb|HO012801.1|HO012801
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|254346949|gb|GR856671.1|GR856671
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|7589708|gb|AW705469.1|AW705469
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298168356|gb|HO014531.1|HO014531
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|213594097|gb|DB961957.1|DB961957
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|6915806|gb|AW397336.1|AW397336
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|192299512|gb|FG988767.1|FG988767
EST:     CGAATGAAGCTCTGGGCCACCAACGAGATTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|58021556|gb|CX708297.1|CX708297
EST:     CGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298199038|gb|HO042401.1|HO042401
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298183962|gb|HO029175.1|HO029175
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|16282896|gb|BI945262.1|BI945262
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298191893|gb|HO035975.1|HO035975
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|213617196|gb|DB963759.1|DB963759
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|13478877|gb|BG508220.1|BG508220
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298172752|gb|HO020306.1|HO020306
EST:     CGAATGAAGCTCTGGGCCACCAGCGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298191627|gb|HO039106.1|HO039106
EST:     CGAATGAAGCCCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|7146871|gb|AW508793.1|AW508793
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|17400723|gb|BM177505.1|BM177505
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGATTTATGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|4396503|gb|AI495500.1|AI495500
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|15813728|gb|BI786003.1|BI786003
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|46492799|gb|CN472355.1|CN472355
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|15813525|gb|BI785800.1|BI785800
EST:     CTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|254341413|gb|GR855141.1|GR855141
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|192328396|gb|FK020107.1|FK020107
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|10708965|gb|BF008750.1|BF008750
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|42722744|gb|CK768643.1|CK768643
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298180455|gb|HO022008.1|HO022008
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGCCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|31474625|gb|CD416653.1|CD416653
EST:     CCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTCCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|4436963|gb|AI522828.1|AI522828
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298173442|gb|HO016778.1|HO016778
EST:     CGAATGAAGCTCTGGGCCGCCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTACTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|19054214|gb|BM732881.1|BM732881
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298171669|gb|HO021261.1|HO021261
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAGAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|151399094|gb|EV268965.1|EV268965
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|254346948|gb|GR856670.1|GR856670
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|213593205|gb|DB966086.1|DB966086
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298175900|gb|HO015305.1|HO015305
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGGGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|31458364|gb|CD400392.1|CD400392
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|46492879|gb|CN472435.1|CN472435
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|4284454|gb|AI440783.1|AI440783
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|58022197|gb|CX708938.1|CX708938
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|18040316|gb|BM308610.1|BM308610
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|4313673|gb|AI460792.1|AI460792
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|4260137|gb|AI416633.1|AI416633
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298175503|gb|HO018214.1|HO018214
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298181632|gb|HO025807.1|HO025807
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCGATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298174886|gb|HO014803.1|HO014803
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298194054|gb|HO040702.1|HO040702
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298188527|gb|HO035220.1|HO035220
EST:     CGAATGAAGCTCTGGGCCACCGACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|13791133|gb|BG653724.1|BG653724
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|19053219|gb|BM731886.1|BM731886
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|254332266|gb|GR843850.1|GR843850
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|7924745|gb|AW830771.1|AW830771
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATNGGCCAAGTGC
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAAT-GGCCAAGTGC
EST: gi|57574691|gb|CX547666.1|CX547666
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|31467724|gb|CD409752.1|CD409752
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|27423942|gb|CA935462.1|CA935462
EST:     GAATGAAGCTCTGGTGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAATATTTATGGCCAAGTGCT
genomic: GAATGAAGCTCTGG-GCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|15814346|gb|BI786621.1|BI786621
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTTGCTCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298197523|gb|HO045002.1|HO045002
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|7042048|gb|AW471942.1|AW471942
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298171623|gb|HO021215.1|HO021215
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|58018334|gb|CX705076.1|CX705076
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|6847520|gb|AW349881.1|AW349881
EST:     CGAATGAAGNNNNGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|31460944|gb|CD402972.1|CD402972
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|7041662|gb|AW471614.1|AW471614
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298174333|gb|HO017669.1|HO017669
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|8286160|gb|BE023719.1|BE023719
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|254336533|gb|GR842712.1|GR842712
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|7685588|gb|AW756236.1|AW756236
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298198692|gb|HO042055.1|HO042055
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|58024513|gb|CX711254.1|CX711254
EST:     CGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298181671|gb|HO025846.1|HO025846
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|209728867|gb|BW666864.1|BW666864
EST:     ACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: ACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
EST: gi|298193912|gb|HO040560.1|HO040560
EST:     CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTG                         GTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT
genomic: CGAATGAAGCTCTGGGCCACCAACGAGGTTCGCGCCAAGTCCAAGTTCTGgtaatgtttt ... tttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttctagggtttaggggctgtttttataattttgaatttgttttgctttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCTTGCCATCAACGAG
                                   tttgttttgctttc  CT-rich tract
                   tttttataattttgaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaatgttttgttcctttttattagttttatttttttgagatccttgatttaatgttttgcgccgtgtattgttttcttagtttccagcaatcagattgaattgcctctgttttgaattctagggtttaggggctgtttttataattttgaatttgttttgctttcaattagGTATTTTCTGAGGAAACTGAAAAAGGTGAAGAAGAGCAATGGCCAAGTGCTTGCCATCAACGAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA