1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaccgatttccatgtttctagggtttagttacttagcaaattatatcctaaaaaaagctgtgatatgtattttgttttgatgtttttctgtgttcttatgtgaaatgcgaaactattgttgatttttttttttttgcttgtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACGCCACATATGTTCCTCACACCGCCGGAAGGTACTCCGTGAAGCGGTTCA
species | Glycine max |
transcript | GLYMA12G32850.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|19053070|gb|BM731737.1|BM731737
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298197636|gb|HO045115.1|HO045115
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|19934619|gb|BQ079649.1|BQ079649
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298178410|gb|HO024145.1|HO024145
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298166705|gb|HO010144.1|HO010144
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|209699234|gb|BW670194.1|BW670194
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298172772|gb|HO020326.1|HO020326
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298169887|gb|HO018511.1|HO018511
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298199446|gb|HO042809.1|HO042809
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|254347062|gb|GR856732.1|GR856732
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|57574861|gb|CX547836.1|CX547836
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCAGATCGATGTC-AGCTCTTTAACCGCTGGAGCTTCGAGGATA-TGANG GTTACTGACATTTCACTGGCTGATTACATTGGAG-TGCGGGCATCCAAGCEST: gi|193321667|gb|FK284095.1|FK284095
genomic: CCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGA-Ggtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGC-GGCATCCAAGC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298191427|gb|HO038906.1|HO038906
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGTTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|151400398|gb|EV270212.1|EV270212
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|20207721|gb|BQ133810.1|BQ133810
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298164708|gb|HO014353.1|HO014353
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|151394461|gb|EV264332.1|EV264332
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|213604803|gb|DB960526.1|DB960526
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|254347061|gb|GR856731.1|GR856731
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|13790967|gb|BG653558.1|BG653558
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|213601185|gb|DB956493.1|DB956493
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298166882|gb|HO010321.1|HO010321
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: GAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|6718846|gb|AW306493.1|AW306493
genomic: GAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|213589928|gb|DB959483.1|DB959483
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|7691622|gb|AW759746.1|AW759746
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCCGCATCCAAGCACEST: gi|192294201|gb|FG986290.1|FG986290
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|209714865|gb|BW682030.1|BW682030
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|15204135|gb|BI426903.1|BI426903
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298171177|gb|HO016209.1|HO016209
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGCCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|7232856|gb|AW568208.1|AW568208
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|193632123|gb|FK582771.1|FK582771
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG ATTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298193077|gb|HO033511.1|HO033511
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|13251909|gb|BG362812.1|BG362812
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|193722166|gb|FK660776.1|FK660776
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG ATTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|193476050|gb|FK441347.1|FK441347
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG ATTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|193517028|gb|FK476096.1|FK476096
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG ATTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|13789074|gb|BG651675.1|BG651675
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|6913538|gb|AW395068.1|AW395068
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|193725948|gb|FK658898.1|FK658898
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG ATTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|33388884|gb|CA852091.1|CA852091
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298187118|gb|HO034267.1|HO034267
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|9564033|gb|BE473542.1|BE473542
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|42722858|gb|CK768757.1|CK768757
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|192301185|gb|FG990165.1|FG990165
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|17963970|gb|BM270712.1|BM270712
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|20207510|gb|BQ133599.1|BQ133599
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|18730141|gb|BM525707.1|BM525707
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|192333172|gb|FK026501.1|FK026501
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|10232448|gb|BE801336.1|BE801336
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|213587758|gb|DB955620.1|DB955620
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|193568377|gb|FK523468.1|FK523468
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG ATTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|31561794|gb|CD487632.1|CD487632
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|10843914|gb|BF067268.1|BF067268
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|5819946|gb|AI988083.1|AI988083
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|23052301|gb|BU577141.1|BU577141
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|207720563|gb|GD703496.1|GD703496
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|298171534|gb|HO016566.1|HO016566
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|6482944|gb|AW202210.1|AW202210
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|193554423|gb|FK511368.1|FK511368
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG ATTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|208182807|gb|GD981029.1|GD981029
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTAGAGTTGCGGCATCCAAGCACEST: gi|192324473|gb|FK016424.1|FK016424
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|4397518|gb|AI496515.1|AI496515
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|8283253|gb|BE020814.1|BE020814
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACEST: gi|209696973|gb|BW660538.1|BW660538
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
EST: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAG GTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
genomic: CCCAGATCGATGTCAAGCTCTTTAACCGCTGGAGCTTCGAGGATATTGAGgtaccgattt ... gtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCAC
cttatgtgaaatgcgaaactattgttgatttttttttttttgcttgtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACGCCACATATGTTCCTCACACCGCCGGAAGGTACTCCGTGAAGCGGTTCA
tgttgat putative branch site (score: 4)
tttttttttttttgct CT-rich tract
aaactattgttgattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaccgatttccatgtttctagggtttagttacttagcaaattatatcctaaaaaaagctgtgatatgtattttgttttgatgtttttctgtgttcttatgtgaaatgcgaaactattgttgatttttttttttttgcttgtgttatcagGTTACTGACATTTCACTGGCTGATTACATTGGAGTTGCGGCATCCAAGCACGCCACATATGTTCCTCACACCGCCGGAAGGTACTCCGTGAAGCGGTTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC