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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacaggactataacagtgtcagagagagaagagggcgctttcatcatgtttttttttcatctcttactttgcaatagCTAAAGTAGCTTCCTCTGGATATGCTCAATT

Basic information

species Glycine max
transcript GLYMA11G29860.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agagagaagagggcgctttcatcatgtttttttttcatctcttactttgcaatagCTAAAGTAGCTTCCTCTGGATATGCTCAATT
                                      ctcttac  putative branch site (score: 3)
                     tcatgtttttttttca  CT-rich tract
                    atcatgttttttttt  TA-rich tract