Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtattgatttgttatgtaatatgaatttggccttgaattgaatataataggaatttttttagtgttgttggcatgttttgttatggtgtggtgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGGCGGCTGAATAAGTGTGGGGTTATTAGCCCTCG

Basic information

species Glycine max
transcript GLYMA11G00590.2
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G00590.2 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G018228_T04 (Zea mays), 3'ss of exon 2
gtattgatttgttatgtaatatgaatttggccttgaattgaatataataggaatttttttagtgttgttggcatgttttgttatggtgtggtgctttgt-agGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGGCGGCTGAATAAGTGTGGGGTTATTAGCCCTCG
                     | |      |||  |  | |     ||  |||||  || | |  ||  |  | |        |  | | || || | | ||| |||||||| ||||||||||| || ||||||||||| |||||||| |||||||| ||  |||||||  | |||||||| ||||| ||||||||||| ||
--------------------gttagccct-cctcaaccttatgcccatttgaattgcttcatt-ctgaggatacgcccctgattattattgttctatattagGTTACATTGGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATCGTGGTGGAGCTGAATGGAAGACTGAATAAATGTGGTGTTATTAGCCCACG

upper sequence: GLYMA11G00590.2 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G328578_T01 (Zea mays), 3'ss of exon 2
gtattgatttgttatgtaatatgaatttggccttgaattgaatataataggaatttttttagtgttgttggcatgttttgttatggtgtggtgctttgt-agGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGGCGGCTGAATAAGTGTGGGGTTATTAGCCCTCG
                     | |      |||  |  | |     ||  |||||  || | |  ||  |  | ||       |  | | || || | | ||| |||||| | ||||||||||| || ||||||||||| |||||||| |||||||| ||  |||||||  | |||||||| ||||| ||||||||||| ||
--------------------gttagccct-cctcaaccttatgcccatttgaattgcttcatt-ctgaggatacgtccctgattattattgttctatattagGCTACATTAGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATCGTGGTGGAGCTGAATGGAAGACTGAATAAATGTGGTGTTATTAGCCCACG

upper sequence: GLYMA11G00590.2 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G012117_T01 (Zea mays), 3'ss of exon 1
gtattgatttgttatgtaatatgaatttggccttgaattgaatataataggaatttttttagtgttgttggcatgttttgttatggtgtggtgctttgt-agGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGGCGGCTGAATAAGTGTGGGGTTATTAGCCCTCG
                     | |      |||  |  | |     ||  |||||  || | |  ||  |  | ||       |  | | || || | | ||| |||||| | |||||||||||  ||||||||||||| | |||||| |||||| | ||  |||||||  |||||||||| ||||| ||||||||||| ||
--------------------gttagccct-cctcaaccttatgcccatttgaattgcttcatt-ctgaggatacgtccctgattattattgttctatattagGCTACATTAGCGAGTTCGAGTACCTTGATGACCACAGAGGTGGGAAGATCGTGATGGAGCTGAATGGCAGGCTGAATAAATGTGGTGTTATTAGCCCACG

upper sequence: GLYMA11G00590.2 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G083497_T04 (Zea mays), 3'ss of exon 1
gtattgatttgttatgtaatatgaatttggccttgaattgaatataataggaatttttttagtgttgttggcatgttttgttatggtgtggtgctttgt-agGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGGCGGCTGAATAAGTGTGGGGTTATTAGCCCTCG
                          || |   | |||    |     |      ||   ||  ||    | ||   |   |     ||| |   || | ||| |||||||| ||||||||||| || ||||||||||| |||||||| || ||||| ||| |||| ||  | || || || || || || |||||||| ||
-------------------------gttagttctcaatctcgtgccccatttcaattggcagcattccgaggatacgtacctgattagtgctatattattagGATACATTGGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATTGTGGTGGAACTGAACGGCAGACTAAACAAATGCGGTGTAATTAGCCCCCG

upper sequence: GLYMA11G00590.2 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G177720_T01 (Zea mays), 3'ss of exon 1
gtattgatttgttatgtaatatgaatttggccttgaattgaatataataggaatttttttagtgttgttggcatgttttgttatggtgtggtgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGGCGGCTGAATAAGTGTGGGGTTATTAGCCCTCG
          ||||  ||  |     | | ||||        | | | | || |   ||  | |     | |||||          |||| || | |||||| |||||||| ||||||||||| |||||||||||| |  | || || |||||||| ||| | || ||| ||||||| ||||| || || || ||||||||
----------gttagctagcac----tcgaccttatgccctgtttca-atgactccattccgag-----gacatgtccatgatcattgtgctgttatgtagGCTACATTGGAGAGTTCGAGTACGTTGATGACCACCGATCGGGCAAGATCGTGGTCGAACTCAACGGGAGGCTGAACAAGTGCGGCGTCATCAGCCCTCG

upper sequence: GLYMA11G00590.2 (Glycine max), 3'ss of exon 2
lower sequence: Vv13s0019g00530.t01 (Vitis vinifera), 3'ss of exon 3
-------------------------gtattgatttgttatgtaatatgaatttggccttgaattgaatataataggaatttttttag--tgttgttggcatgttttgtt-atggtgtggtgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGGCGGCTGAATAAGTGTGGGGTTATTAGCCCTCG
                           |||| ||   | |    |     |||    ||| ||||  | |  | |  |  | | ||   | || ||  | | ||||  | ||  | |  |||| |  ||| |||||||| ||||| |||||||||||||| |||||| |||| || || || |||||| |||||||  | || || || ||||||||||| || || ||
gtactaatcaattcatttgaatttcagattgtttcaattttcttttcttctttacttttgcattgtttttttttgttacctgtgtacatttttattcacgtattttactgattttattttgctctacagGTTACATTGGAGAGTTTGAGTATGTTGATGATCACAGGTCTGGAAAGATTGTTGTTGAACTGAATGGAAGACTAAACAAATGTGGGGTTATCAGTCCCCG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298184409|gb|HO029622.1|HO029622
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|207731182|gb|GD705605.1|GD705605
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGA
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGA
EST: gi|193713108|gb|FK655843.1|FK655843
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|17963415|gb|BM270164.1|BM270164
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|24205698|gb|BU964951.1|BU964951
EST:     TATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: TATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193728271|gb|FK665041.1|FK665041
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|16282159|gb|BI944868.1|BI944868
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|192334085|gb|FK026242.1|FK026242
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|16279412|gb|BI943422.1|BI943422
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|207687098|gb|GD669786.1|GD669786
EST:     GCCATCCTCCAAGGTCACCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|16280605|gb|BI944049.1|BI944049
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|23734466|gb|BU765462.1|BU765462
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193701470|gb|FK638229.1|FK638229
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|192302539|gb|FG996289.1|FG996289
EST:     GCCATCCTCCAAGGTCACCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|209725320|gb|BW658231.1|BW658231
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208211277|gb|GE010854.1|GE010854
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|192324678|gb|FK016839.1|FK016839
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193599382|gb|FK552073.1|FK552073
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGA
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGA
EST: gi|207786851|gb|GD755786.1|GD755786
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208062647|gb|GD860752.1|GD860752
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGCATGTTGATGACCACA
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACA
EST: gi|214005097|gb|DB985693.1|DB985693
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193418914|gb|FK382690.1|FK382690
EST:     CCATCCTCCAAGGTCATCATAAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: CCATCCTCCAAGGTCATCAT-AAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|209725321|gb|BW658232.1|BW658232
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|298178123|gb|HO027506.1|HO027506
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|16278946|gb|BI943176.1|BI943176
EST:     GCCATCTTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGANAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|16278493|gb|BI942932.1|BI942932
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208258747|gb|GE054200.1|GE054200
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|22522913|gb|BU081724.1|BU081724
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208094442|gb|GD891619.1|GD891619
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGGAAAATC
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGG-AAAATC
EST: gi|151406750|gb|EV276565.1|EV276565
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|192334086|gb|FK026243.1|FK026243
EST:     CCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: CCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|42722780|gb|CK768679.1|CK768679
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193345560|gb|FK312495.1|FK312495
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|16281310|gb|BI944421.1|BI944421
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208156988|gb|GD952090.1|GD952090
EST:     TCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: -CCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|31475515|gb|CD417543.1|CD417543
EST:     CATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCCCAGGGCTGGGAAAATCG
genomic: CATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|20498350|gb|BQ273280.1|BQ273280
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|16282503|gb|BI945052.1|BI945052
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|10843829|gb|BF067222.1|BF067222
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGGCTGGGAAAATC
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACA-GGGCTGGGAAAATC
EST: gi|16277578|gb|BI942453.1|BI942453
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193418235|gb|FK384699.1|FK384699
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|213595374|gb|DB968464.1|DB968464
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|15589711|gb|BI674327.1|BI674327
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|16284124|gb|BI945918.1|BI945918
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|213595921|gb|DB955985.1|DB955985
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193523936|gb|FK480029.1|FK480029
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAAGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208100394|gb|GD898046.1|GD898046
EST:     GCCATCCTCCAAGGTCATCAT-AAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|16282482|gb|BI945040.1|BI945040
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|193404235|gb|FK366569.1|FK366569
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|213608791|gb|DB974432.1|DB974432
EST:     ATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACGACAGGGCTGGGAAAATCG
genomic: ATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|16282605|gb|BI945106.1|BI945106
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|208183360|gb|GD985278.1|GD985278
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTCGATGACCACAGGGCTGGGAAA-TCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|298190876|gb|HO032997.1|HO032997
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|192327301|gb|FK018123.1|FK018123
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|15336966|gb|BI497622.1|BI497622
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGTTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|207787889|gb|GD761589.1|GD761589
EST:     TAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: TAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|16348858|gb|BI974453.1|BI974453
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGTTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
EST: gi|213610602|gb|DB960627.1|DB960627
EST:     GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACG                         GGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG
genomic: GCCATCCTCCAAGGTCATCATAAAATTCCTATTGGTCATGCAGAAGCACGgtattgattt ... tgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ataggaatttttttagtgttgttggcatgttttgttatggtgtggtgctttgtagGGTACATTGGTGAGTTCGAGTATGTTGATGACCACAGGGCTGGGAAAATCGTGGTTGAATTGAATGGGCGGCTGAATAAGTGTGGGGTTATTAGCCCTCG
     aatttttttagtgtt  TA-rich tract