Skip to another splice site:
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 5'  3'   		2  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ggtctgcttactgtcgcttattttcaagcatattatggtgtgtgacttggtgttatgaactttgtatgctcatgtagactgtgattgtttcaaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGATCTTCAAGGGGATGAGGATCATGCATTCAAGAAGATTAGGTTGAGAGCTG

Basic information

species Glycine max
transcript GLYMA10G39050.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G39050.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os03g10340.1 (Oryza sativa), 3'ss of exon 2
--ggtctgcttactgtcgcttattttcaagcatattatggtgtgtgacttggtgttatgaactttgtatgctcatgtagactgtgattgtttcaa--ataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGATCTTCAAGGGGATGAGGATCATGCATTCAAGAAGATTAGGTTGAGAGCTG
   ||||| | |   |   |||  |      |  |       |||  ||    || || |  | ||    |   ||  || | | | | ||||     |   ||||||||||||| || || |||||||||||||||||||||||||| |||||||| ||    ||||||||||| || | || |||||| ||  |  | ||||
tttgtctgttcatcatgctttaggtctgtcaacctctaaacctgtagct----gtcataatttatgatgtcatctgctgattctcaatatttctttcgttttagATTGCTTCTGAGGGCCTAAAGCATAGAGTGTTTGAGGTCTCCTTAGCTGATCTCCAGAACGATGAGGATCAGGCGTACAGGAAGATCAGACTTCGTGCTG

upper sequence: GLYMA10G39050.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os12g21798.1 (Oryza sativa), 3'ss of exon 2
ggtctgcttactgtcgcttattttcaagcatattatggtgtgtgacttggtgttatgaactttg-tatgctcatgtagactgtgat-tgtttcaaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGATCTTCAAGGGGATGAGGATCATGCATTCAAGAAGATTAGGTTGAGAGCTG
  | | | |    | |  | |||    |  | |     | ||    |  |    || | ||| | |||  |    |    | |||| | |     ||   |||||||||| || || ||||||||  | |||||||||||||||||||||||||||||    ||||||||||| || | |   ||||| ||  |  | || |
--tgttcctttatttgtctgtttatctgtgtttacatatttggtcatcagcaacataatcttagatatcgtttgatgacatttgatatttccttcattttagATTGCTTCAGAGGGCCTCAAGCACCGTGTGTTTGAGGTCTCCTTGGCTGATCTTCAGAACGATGAGGATCAGGCGTACCGTAAGATCAGACTACGTGCCG

upper sequence: GLYMA10G39050.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os02g18550.1 (Oryza sativa), 3'ss of exon 2
ggtctgcttactgtcgcttattttcaagcatattatggt-gtgtgacttggtgttatgaactttgtatgctcatgtagactgtg-attgtttcaaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGATCTTCAAGGGGATGAGGATCATGCATTCAAGAAGATTAGGTTGAGAGCTG
  |   |    | |  ||| | |  || | |  || |||  | ||| ||  |   | | ||| ||| || |  ||   | | |  ||    | |  |   ||||||| ||||| || ||||||||| | || ||||| ||||||||||| ||||||||    || |||||||| || | || |||| ||||  |  | ||||
aatacccaagatatttctt-tgtgtaatcttcctaaggttatctgaattttttaca-gcactatgtctgttgctgattattattcatgaaattattttctagATTGCATCTGAGGGTCTCAAGCATCGTGTCTTTGAAGTCTCCTTGGCGGATCTTCAGAATGACGAGGATCAGGCTTACAGGAAGGTTAGACTTCGTGCTG

upper sequence: GLYMA10G39050.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G703354_T01 (Zea mays), 3'ss of exon 2
ggtctgcttactgtcgcttattttcaagcatattatggtgtgtga---cttggtgttatg-aactttgtatgctcatgtagactgtgattgtt--tcaaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGATCTTCAAGGGGATGAGGATCATGCATTCAAGAAGATTAGGTTGAGAGCTG
       ||||  |    |    | || ||| | |    || |      ||    || ||  | ||  ||   || ||||        | ||   |    |   ||||||| ||||| ||  | ||||| ||||| |||||||||||||||| |||||||||  | ||||| ||  |  | | || |||||| ||  |  | || |
------tttaccataatcttcaattaatcatttcaaaaagtatacatttttacctttttgtgatttcataacttcctgtatctcaatttcgtcgatttgtttctagATTGCCTCTGAGGGTTTAAAGCACAGAGTATTTGAGGTCTCCTTGGTTGATCTTCATAGTGATGAAGACAAGACGTACATGAAGATCAGACTTTGTGCGG

upper sequence: GLYMA10G39050.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G145258_T01 (Zea mays), 3'ss of exon 2
-ggtctgcttac-tgtcgct-tattttcaagcatattatggtgtgtgacttggtg-ttatgaactttgtatgctcatgtagactgtgattgtttcaaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGATCTTCAAGGGGATGAGGATCATGCATTCAAGAAGATTAGGTTGAGAGCTG
  ||||  |||  || | || | ||| |||   ||||  |   |  ||     || ||     | |  | |||| ||     |  |  || | ||   |   ||||||||||||| || || ||||| ||||| |||||||| | | | ||||||||||| || || |||||||| || | || ||| || ||| |  | ||||
tagtcttattaggtgccactctgtttacaatgttattcagaacttagatgcattgcttgctgtcctaatttgctgatt---gccatactt-tctctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGATCTTCAGGGCGACGAGGATCAAGCTTACAGGAAAATCAGGCTCCGTGCTG

upper sequence: GLYMA10G39050.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G030915_T03 (Zea mays), 3'ss of exon 2
-ggtctgcttac-tgtcgcttattttcaagcatattatggtgtgt-gacttggtgttatgaactttgtatgctcatgtagactgtgattgtttcaaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGATCTTCAAGGGGATGAGGATCATGCATTCAAGAAGATTAGGTTGAGAGCTG
  ||||  |||  || |||||  |||  |   |  |   |   || ||     || |        ||  |  ||   | ||| ||  || | ||   |   ||||||||||||| || || ||||| ||||| |||||||| | | | ||||||||||| || || |||||||| || | || ||| || ||| |  | ||||
tagtcttattaggtgccgctttgtttgcaatgttattcagaacgtagatgcactgcttactgtcctgatttttcg-attgac-gtactt-tctctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGATCTTCAGGGCGACGAGGATCAAGCTTACAGGAAAATCAGGCTCCGTGCTG

upper sequence: GLYMA10G39050.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G030915_T08 (Zea mays), 3'ss of exon 2
-ggtctgcttac-tgtcgct-tattttcaagcatattatggtgtgtgacttggtg-ttatgaactttgtatgctcatgtagactgtgattgtttcaaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGATCTTCAAGGGGATGAGGATCATGCATTCAAGAAGATTAGGTTGAGAGCTG
  ||||  |||  || | || | ||| |||   ||||  |      ||     || ||     | |  | | || ||  |       | | | ||   |   ||||||||||||| || || ||||| ||||| |||||||| | | | ||||||||||| || || |||||||| || | || ||| || ||| |  | ||||
tagtcttattaggtgccactctgtttgcaatgttattcagaacgtagatgcactgcttgctgtcctaatttactgattgacgt----actttatctggttttagATTGCTTCTGAGGGTCTGAAGCACAGAGTCTTTGAGGTTTGCCTAGCTGATCTTCAGGGCGACGAGGATCAAGCTTACAGGAAAATCAGGCTCCGTGCTG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298163724|gb|HO012457.1|HO012457
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|4296137|gb|AI442432.1|AI442432
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|209715748|gb|BW674384.1|BW674384
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCAT--ACTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|15815377|gb|BI787652.1|BI787652
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|6483129|gb|AW202321.1|AW202321
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|298184189|gb|HO029402.1|HO029402
EST:     AAGTGTAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGCCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|17400604|gb|BM177386.1|BM177386
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|298181510|gb|HO022949.1|HO022949
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGCCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|17519736|gb|BM188778.1|BM188778
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|208270711|gb|GE070517.1|GE070517
EST:     AAGTGAAAAATGCTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|207766601|gb|GD736577.1|GD736577
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAG
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAG
EST: gi|208220818|gb|GE017226.1|GE017226
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTG
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTG
EST: gi|193692250|gb|FK628111.1|FK628111
EST:     TCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: TCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193677694|gb|FK614920.1|FK614920
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGGCTCAAGCATAG
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAG
EST: gi|193537069|gb|FK497954.1|FK497954
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|298181239|gb|HO022678.1|HO022678
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|213601104|gb|DB956454.1|DB956454
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193425971|gb|FK387430.1|FK387430
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|192322738|gb|FK014429.1|FK014429
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGC
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGC
EST: gi|298181857|gb|HO026032.1|HO026032
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCCTCTGAAGGACTCAAGCATAGATTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|24137050|gb|BU927560.1|BU927560
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193586319|gb|FK539997.1|FK539997
EST:     AAGTGAAAAATGTTGACAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|7286160|gb|AW598647.1|AW598647
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193313779|gb|FK282968.1|FK282968
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|298186463|gb|HO037096.1|HO037096
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGCCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGGGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|6747622|gb|AW318135.1|AW318135
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|8827149|gb|BE210879.1|BE210879
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTNCCTC-TTGGCTG
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGT-C-TCCTTGGCTG
EST: gi|298185685|gb|HO030898.1|HO030898
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193364715|gb|FK330130.1|FK330130
EST:     TGAAAAATGTTGGCAAAAACCCTACGTACTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAG
genomic: TGAAAAATGTTGGCAAAA-CCCT-CGT-CTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAG
EST: gi|7925465|gb|AW831491.1|AW831491
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|207712645|gb|GD694543.1|GD694543
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|213605677|gb|DB972311.1|DB972311
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193625541|gb|FK574715.1|FK574715
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAG
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAG
EST: gi|193319720|gb|FK285171.1|FK285171
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|213597799|gb|DB960356.1|DB960356
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCAT--ACTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193514315|gb|FK470631.1|FK470631
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193714025|gb|FK654521.1|FK654521
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATA
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATA
EST: gi|208091352|gb|GD886303.1|GD886303
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|208288398|gb|GE088751.1|GE088751
EST:     AAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|41145968|gb|CK606179.1|CK606179
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193477802|gb|FK442307.1|FK442307
EST:     AAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|208285258|gb|GE083384.1|GE083384
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAG
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAG
EST: gi|298162967|gb|HO011700.1|HO011700
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|213604674|gb|DB956057.1|DB956057
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193717145|gb|FK654703.1|FK654703
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|209715372|gb|BW682103.1|BW682103
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193721041|gb|FK661305.1|FK661305
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|6567096|gb|AW234723.1|AW234723
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|192324381|gb|FK015732.1|FK015732
EST:     AAGTGAAAAATGTTGGCGAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|209713364|gb|BW653861.1|BW653861
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|298194405|gb|HO041053.1|HO041053
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|14258996|gb|BG881904.1|BG881904
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193480468|gb|FK445936.1|FK445936
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|18040054|gb|BM308348.1|BM308348
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193348736|gb|FK315642.1|FK315642
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|21676815|gb|BQ629166.1|BQ629166
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACTAAG                         ATTGTTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193712572|gb|FK649679.1|FK649679
EST:     GTTGGCTAAAACCCTTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: GTTGGC-AAAACCC-TCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|298181439|gb|HO022878.1|HO022878
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193622122|gb|FK567678.1|FK567678
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|213613878|gb|DB971023.1|DB971023
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193311617|gb|FK278089.1|FK278089
EST:     -AGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|208025868|gb|GD824350.1|GD824350
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|208295606|gb|GE092737.1|GE092737
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAG
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAG
EST: gi|208069062|gb|GD863804.1|GD863804
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAG
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAG
EST: gi|207747988|gb|GD720861.1|GD720861
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|192324800|gb|FK016541.1|FK016541
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|208111733|gb|GD913231.1|GD913231
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAG
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAG
EST: gi|193658456|gb|FK605927.1|FK605927
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAG
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAG
EST: gi|151407517|gb|EV277332.1|EV277332
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|298185229|gb|HO030442.1|HO030442
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|151412994|gb|EV282802.1|EV282802
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|207700032|gb|GD681627.1|GD681627
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|208097815|gb|GD892612.1|GD892612
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAG
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAG
EST: gi|207751363|gb|GD724826.1|GD724826
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACTAAG                         ATTGCTTCTGAAGGACTCAAGCA
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCA
EST: gi|207838536|gb|GD812396.1|GD812396
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|298184251|gb|HO029464.1|HO029464
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|298189408|gb|HO037811.1|HO037811
EST:     ATGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|193644167|gb|FK592502.1|FK592502
EST:     GTGAAAAATGTTGGCTAAAACCCTTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: GTGAAAAATGTTGGC-AAAACCC-TCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|298180158|gb|HO025373.1|HO025373
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|21889801|gb|BQ743014.1|BQ743014
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
EST: gi|298172963|gb|HO019962.1|HO019962
EST:     AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAG                         ATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT
genomic: AAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGTACCAAGgtactgcttt ... caaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGAT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cttggtgttatgaactttgtatgctcatgtagactgtgattgtttcaaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGATCTTCAAGGGGATGAGGATCATGCATTCAAGAAGATTAGGTTGAGAGCTG
                                       ttgtttc  CT-rich tract
                                      attgtttcaaataa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ggtctgcttactgtcgcttattttcaagcatattatggtgtgtgacttggtgttatgaactttgtatgctcatgtagactgtgattgtttcaaataacagATTGCTTCTGAAGGACTCAAGCATAGAGTGTTTGAGGTCTCCTTGGCTGATCTTCAAGGGGATGAGGATCATGCATTCAAGAAGATTAGGTTGAGAGCTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGCT
- - tgcttac
- - - - - - - - - - - ttcaagc
- - - - - - - - - - - - - - - - - -tggtgtg
- - - - - - - - - - - - - - - - - - - - - - -cttggtg
- - - - - - - - - - - - - - - - - - - - - - - - - - -tatgaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtatgct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gactgtg