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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgcttttttttattggttgagttcaattgctcgttaattcgcacatttttgtggttattgttgaaattgggatttttgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG

Basic information

species Glycine max
transcript GLYMA10G36610.3
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G36610.3 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os07g07709.1 (Oryza sativa), 3'ss of exon 2
gtgcttttttt-------tattggttgagttcaattgctcgttaattc---gcacatttttgtggttattgttgaaattgggatttttgtttgtc---agGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
 ||  ||| |         ||  | ||      |||    |  ||  |   | || ||| |||   || ||   ||  |   | || | ||| ||   |||||||||||  | ||| |||  ||| | ||  |  | |||||||||||||| |||||| | ||||||||| |||| ||||||||| ||||||| ||||||
atgactttgtaaccaaaacataagatggtgatgattttgtgcaaaaccaaaggacttttatgttactagtgagaaagctaacaattatttttctctgtagGGCTGGTGAACTCACTCCTGAGGAGCTTGAGCGCCTCATGACTGTGGTGGCAAACCCTCGCCAGTTCAAGGTCCCTGACTGGTTTCTGAACAGGAAGAAG

upper sequence: GLYMA10G36610.3 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os07g07719.1 (Oryza sativa), 3'ss of exon 1
gtgcttttttt-------tattggttgagttcaattgctcgttaattc---gcacatttttgtggttattgttgaaattgggatttttgtttgtc---agGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
 ||  ||| |         ||  | ||      |||    |  ||  |   | || ||| | |   || ||   ||  |   | || ||||| ||   |||||||||||  | ||| |||  ||| | ||  |  | |||||||||||||| |||||| | ||||||||| |||| ||||||||| ||||||| ||||||
atgactttgtaaccaaaacataagatggtgatgattttgtgcaaaaccaaaggacttttattttactagtgagaaagctaacaattatgtttctctgtagGGCTGGTGAACTCACTCCTGAGGAGCTTGAGCGCCTCATGACTGTGGTGGCAAACCCTCGCCAGTTCAAGGTCCCTGACTGGTTTCTGAACAGGAAGAAG

upper sequence: GLYMA10G36610.3 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os03g58050.1 (Oryza sativa), 3'ss of exon 2
--------------gtgcttttttttattggttgagttcaat--tgctcgttaattcgcacatttttgtggttattgt--tgaaattgggatttttgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
               | ||  || |  | |   ||  ||  |  || | | |   | |  |    |   |    | ||  ||     | | ||   |  || |||||| |||||| | ||  | |  ||| ||||  |  ||||||| ||||||||||||||  ||||||||||| | || ||||||||  | ||||| ||||||
gcaagaacctcctcctcctccttctcgtcgtcagatctcggtaatggtgggtgggtgggtcgggctgacgaccgtcgtgctgtgtccgtggttggggagtg-cagGGCCGGTGAGCTTACGCCGGAGGAGCTGGAGCGGCTGATGACCGTGGTGGCGAACCCGCGGCAGTTCAAGGTGCCCGACTGGTTCCTCAACAGGAAGAAG

upper sequence: GLYMA10G36610.3 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G178341_T01 (Zea mays), 3'ss of exon 2
gtgcttttttttattggttgagttcaattgctcgttaattcg-cacatttttgtggttattgttgaaattgggatttttgtttgt---cagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
            |   | || |||      ||    |  |   ||  | | | |||| |  | ||    ||  ||    |   ||   |||||| |||||| ||||  |||  ||| ||||  |  ||||||| || |||||||||||||||||||||||| | || ||||||||  | ||||| ||||||
----------gcaagcgctgtgttttcgctctgaggaccttatcaggtctctctggtgac-gatgtgcctgacatgccggcgagtgtgcagGGCCGGTGAGCTGACGCCTGAAGAGCTGGAGCGCCTGATGACGGTCGTGGCGAACCCTAGGCAGTTCAAGGTGCCGGACTGGTTCCTCAACAGGAAGAAG

upper sequence: GLYMA10G36610.3 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G130544_T01 (Zea mays), 3'ss of exon 1
--gtgcttttttttattggttgagttcaattgctcgttaattcgcacatttttgtggttattgttgaaattgggatttttgtttgt---cagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
    || |     | | | |  |     |||    | |   ||         ||||| |  | |      ||   |||  ||  ||   |||||| || ||| ||||  ||| |||| ||||  |  ||||||| || ||||| |||||||||||||||||| | || ||||||||  | ||||| ||||||
gcaagcgtcgcgctttagctccaaggatattatcagatctctctggtgacgatgtggctgatatgttg--tgatgtttcggtgagtgtgcagGGCCGGCGAGCTGACGCCTGATGAGCTGGAGCGCCTGATGACGGTCGTGGCCAACCCTAGGCAGTTCAAGGTGCCGGACTGGTTCCTCAACAGGAAGAAG

upper sequence: GLYMA10G36610.3 (Glycine max), 3'ss of exon 2
lower sequence: AT4G09800.1 (Arabidopsis thaliana), 3'ss of exon 2
-----------gtgcttttttttat-tggttgagttcaattgctcgttaattcgcacatttttgtggttattgttgaaat-tgggatttttgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
            |   |      || |  ||| ||    | | | |  ||||       |||   ||  |||||||   | |  ||| | |||||  |||||||||||||||  ||||||||||| | ||||   | |||||  | || || |||||  | ||||||||||||||||||||||| ||||||||  |||||
atctctagatcatagatcggcgcatattattgtgtctcgtagtttgcaaattgtgttgctttgtgggagattgttgtcttatatgatgtatgtttaacagGGCTGGTGAGTTATCTGCTGCTGAGATTGATAACCTCATGACAATCGTTGCAAACCCACGTCAGTTCAAGATCCCAGACTGGTTCTTGAACAGGCAGAAG

upper sequence: GLYMA10G36610.3 (Glycine max), 3'ss of exon 2
lower sequence: AT1G34030.1 (Arabidopsis thaliana), 3'ss of exon 2
---------------gtgcttttttttattggttgagttcaattgctcgttaattcgcacatttttgtggttattgttgaaattgggatttttgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
                ||  ||    |||||  | | |    |   ||   || | |||| || |   | || ||||  ||  | || | |    || ||||||||||||||||  |||| |||||| | || |   | |||||| | || || ||||| || ||||||||||| ||||||||||||||||||||| |||| 
aggttcagcaaatagttgtgttagcatattgtataattcttgtgaatc-ccaaattgcactttctctggattgttgtctaatattgg-tctcaacttttcagGGCTGGTGAGTTATCTGCAGCTGAGATTGACAACCTCATGACTATTGTTGCAAACCCAAGACAGTTCAAGATTCCAGACTGGTTTTTGAACAGACAGAAA

upper sequence: GLYMA10G36610.3 (Glycine max), 3'ss of exon 2
lower sequence: AT1G22780.1 (Arabidopsis thaliana), 3'ss of exon 2
gtgcttttttttattggttgagttc-----aattg---ctcgttaattcgcacatttttgtggttattgttgaa-attgggatttttgtttgt-----cagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
  | |||| |||     | ||  |       ||||    || | ||   |     | | |||  | || || ||  ||      |||| | ||     ||||||||| ||  | | |||||||||| | ||||   | |||||  | || || |||||| | |||||||||||||||||||||||| | |||||| | |||
-aggttttctttgcacatagaacttctctagattgatattcttgaagaagtttggtctagtgtgtgtttttaaatgttttttcctttgctggtatattcagGGCTGGAGAACTAAGTGCTGCTGAGATTGATAACCTCATGACAATCGTTGCTAACCCTCGCCAGTTCAAGATCCCAGACTGGTTTCTTAACAGACAAAAG

upper sequence: GLYMA10G36610.3 (Glycine max), 3'ss of exon 2
lower sequence: PP1S14_433V6.1 (Physcomitrella patens), 3'ss of exon 2
------------------gtgcttttttttattggttgagtt-caattgctcgttaattcgcacatttttgtggttattgttgaaattgggatttttgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
                   ||   | |  |  |   | |||   ||| || ||    | |  | | ||  |   || ||  |  | |  | | |    ||   ||| || |||||| || | || |||||| | || |   |||||    | || || || ||| | ||||||||||||||||| |||||| ||||||||||||||
tgctagagtttagggtttctggcgtctacttctctctaagtggtaatcgcccg--ggtccaaagaattc-gcttttcttacttgagtatgcaatcccatt---cagAGCCGGTGAGCTGTCCGCGGCTGAGCTTGAGAACTTGATGGTGATCGTTGCCAATCCTCGCCAGTTCAAGATCCCAGATTGGTTTCTGAACAGAAAGAAG

upper sequence: GLYMA10G36610.3 (Glycine max), 3'ss of exon 2
lower sequence: PP1S242_94V6.1 (Physcomitrella patens), 3'ss of exon 2
gtgcttttttttattggt---tgagttcaattgctc-gttaattcgcacattt---ttgtggttattgttgaaattgggatttttgtttgt------cagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
||  ||     |  ||||   | |||||  || ||  ||| | |  | | |     || |  |||| |||    ||  |  |||| || ||      |||||| || || ||| |||| || ||| | || |   | |||    | || || || ||| | |||||||||||||| || |||||| ||||||||||||| 
gtagttaggcatgctggtgtcttagttcctttactttgttgagtgacgcgtcgcgattttacttatagttcttcttttggctttttttggttgtccccagGGCCGGCGAATTGTCTGCAGCCGAGCTTGAGAACTTAATGGTCATCGTTGCCAATCCTCGCCAGTTCAAGATCCCGGATTGGTTTCTGAACAGAAAGAAA

upper sequence: GLYMA10G36610.3 (Glycine max), 3'ss of exon 2
lower sequence: PP1S72_222V6.2 (Physcomitrella patens), 3'ss of exon 2
---------gtgcttttttttattggttgagttcaattgctcgttaattcgcacatttttgtggttattgttgaaattgggatttttgt--ttgt---cagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
         |   || | |   |  ||  |     |  | |  | | ||   | |      ||   ||   |   |||  |  | | |   |||     |||||||| ||| |  | || |||||| | || |   |||||    | || || |||||| | || |||||||||||||||||||| |||||||| ||||| 
ctgagattaggaattctgtgagtgagtccatgatgaacgttt-tcagttgagagaaaccgatgacaatcactcttattcagcatctcggaattgaatatagGGCTGGCGAGCTCTCCGCAGCTGAGCTCGAGAACCTGATGGTCATCGTTGCTAACCCTCGTCAATTCAAGATCCCAGACTGGTTCTTGAACAGGAAGAAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298163243|gb|HO011976.1|HO011976
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGGCATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|58025002|gb|CX711743.1|CX711743
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254324412|gb|GR833837.1|GR833837
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|58021861|gb|CX708602.1|CX708602
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7924214|gb|AW830240.1|AW830240
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192296950|gb|FG991946.1|FG991946
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192329574|gb|FK023680.1|FK023680
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|12773980|gb|BG238907.1|BG238907
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|193430459|gb|FK393321.1|FK393321
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTG-ATAGTGTG
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTG
EST: gi|298194455|gb|HO041103.1|HO041103
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTGGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|193429729|gb|FK392787.1|FK392787
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|208173359|gb|GD971604.1|GD971604
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|24136492|gb|BU927002.1|BU927002
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTG
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTG
EST: gi|209701973|gb|BW661359.1|BW661359
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7232646|gb|AW568000.1|AW568000
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|17022942|gb|BM093976.1|BM093976
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|298173525|gb|HO016861.1|HO016861
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|16347032|gb|BI972627.1|BI972627
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|13787375|gb|BG649967.1|BG649967
EST:     GTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: GTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|48574772|gb|CO036070.1|CO036070
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCCGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7639852|gb|AW734166.1|AW734166
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|13181455|gb|BG352795.1|BG352795
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|17022040|gb|BM093074.1|BM093074
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|14125520|gb|BG789958.1|BG789958
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|213619773|gb|DB967395.1|DB967395
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254339986|gb|GR858111.1|GR858111
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|207821359|gb|GD790116.1|GD790116
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTG
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTG
EST: gi|7691639|gb|AW759763.1|AW759763
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|15202202|gb|BI425277.1|BI425277
EST:     AGATTCGCCAACATCTTTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGTTTTGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|6483221|gb|AW202397.1|AW202397
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|193497964|gb|FK462512.1|FK462512
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGA
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGA
EST: gi|17519451|gb|BM188493.1|BM188493
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|193584127|gb|FK541507.1|FK541507
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|151411347|gb|EV281158.1|EV281158
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|13252140|gb|BG363043.1|BG363043
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|6747031|gb|AW317487.1|AW317487
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|308097923|gb|HO761094.1|HO761094
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|24135647|gb|BU926157.1|BU926157
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|213587965|gb|DB957438.1|DB957438
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|193712943|gb|FK651478.1|FK651478
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGA
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGA
EST: gi|192327023|gb|FK015205.1|FK015205
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|193360399|gb|FK328053.1|FK328053
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|24206122|gb|BU965375.1|BU965375
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|207838676|gb|GD811626.1|GD811626
EST:     GCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCGTGGTGAGTTGACTGCTGCTGAGTTGG
genomic: GCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGC-TGGTGAGTTGACTGCTGCTGAGTTGG
EST: gi|254333310|gb|GR850560.1|GR850560
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|19270204|gb|BM886460.1|BM886460
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|209701972|gb|BW661358.1|BW661358
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|4291129|gb|AI441717.1|AI441717
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|14990403|gb|BI316076.1|BI316076
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|6725456|gb|AW309855.1|AW309855
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|18040088|gb|BM308382.1|BM308382
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|209726811|gb|BW654876.1|BW654876
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|207844223|gb|GD815234.1|GD815234
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         G-CTGGTGAGTTGA
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGA
EST: gi|213599537|gb|DB975742.1|DB975742
EST:     CTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: CTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7147331|gb|AW509253.1|AW509253
EST:     GACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: GACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192295819|gb|FG990871.1|FG990871
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192329573|gb|FK023679.1|FK023679
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192331377|gb|FK023817.1|FK023817
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|209726797|gb|BW654875.1|BW654875
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192331376|gb|FK023816.1|FK023816
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254339985|gb|GR858110.1|GR858110
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7234114|gb|AW569454.1|AW569454
EST:     CATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: CATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|4290852|gb|AI437536.1|AI437536
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|6502427|gb|AW203800.1|AW203800
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192315879|gb|FK005710.1|FK005710
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|18734437|gb|BM528184.1|BM528184
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|16346995|gb|BI972590.1|BI972590
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|6915330|gb|AW396860.1|AW396860
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|254333309|gb|GR850559.1|GR850559
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|31561377|gb|CD487215.1|CD487215
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|213620508|gb|DB957352.1|DB957352
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|10236176|gb|BE805064.1|BE805064
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|15287838|gb|BI471729.1|BI471729
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|13252531|gb|BG363434.1|BG363434
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|207812413|gb|GD785327.1|GD785327
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|298163208|gb|HO011941.1|HO011941
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTCGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|7232666|gb|AW568020.1|AW568020
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC
EST: gi|192306458|gb|FG997184.1|FG997184
EST:     AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAG                         GGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGAC
genomic: AGATTCGCCAACATCGCTTGCAAGAAGGCTGATGTTGACATGAACAAAAGgtgctttttt ... tgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cgttaattcgcacatttttgtggttattgttgaaattgggatttttgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG
 cgttaat  putative branch site (score: 4)
                                         tttttgttt  putative PPT
                       ttattgttgaaatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgcttttttttattggttgagttcaattgctcgttaattcgcacatttttgtggttattgttgaaattgggatttttgtttgtcagGGCTGGTGAGTTGACTGCTGCTGAGTTGGATAGTGTGATGACTGTGGTGGCGAACCCTAGGCAGTTCAAGATCCCAGACTGGTTTTTGAACAGAAAGAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG