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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gaggtgtagacattattgataagttgcatgtgcatgttacagctttcgagtatttgatttcaaaaccatgtagcataatttttctaccatttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGGCTCTCGCTCACTGACATCAAGATTGATATTAAGAGGATTCCCAAGAAGA

Basic information

species Glycine max
transcript GLYMA10G00680.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G00680.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os02g40880.1 (Oryza sativa), 3'ss of exon 2
--gaggtgtagacattattgataagttgcatgtgcatgttacagctttcgagta-tttgatttcaaaaccatgtagcataatttt-tctaccatttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGGCTCTCGCTCACTGACATCAAGATTGATATTAAGAGGATTCCCAAGAAGA
      |||   |  |  | ||   |   ||  |  | | |     ||  |||  |||||||     |   | |  ||||| | | | | |  |   |   ||||| ||||| |||||||| |||||||| |||| |||  | |||||||||||||| || || ||||||||||||||||| || ||  |  | || |||||||
ctattatgttatcgctgctcatttttctaatcggagt-taattatattgtagtgctttgattattgga---tatcacataactctgttttctgtgaatcaccagGCACTTGTGGATGCTCCTGACATGGTCAGGTGCCAGATCAACTTCAAGAGGCTTTCCCTGACTGACATCAAGATTGACATCAAACGTGTCCCGAAGAAGA

upper sequence: GLYMA10G00680.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G028883_T01 (Zea mays), 3'ss of exon 2
gaggtgtagacattattgataagttgcatgtgcat-gttacagctttcgagtatttgatttc-aaaaccatgtagcataatttttctaccatttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGGCTCTCGCTCACTGACATCAAGATTGATATTAAGAGGATTCCCAAGAAGA
 |  |||  |  | |   || | ||  |  |   | |  | |    |||   ||||| ||||  |       |   ||  | | | | |  | || |   |||||||||||||||| |||||||||||  | | |||| ||||||||||| |||| || || ||||||||||||||||| |||||  |  | || |||||||
tacatgtgaatctga--aattacttctagctattttgagataatcgtcgttgatttgctttctgatgttgattgaaattttgtattttctgtctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGGCTTTCCCTGACTGACATCAAGATTGACATTAAACGTGTCCCAAAGAAGA

upper sequence: GLYMA10G00680.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G140116_T01 (Zea mays), 3'ss of exon 2
--gaggtgtagacattattgataagttgcatgtgcatgttacagctttcgagtatttga-tttcaaaaccatgtagcataatttttctaccatttgttgac-agGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGGCTCTCGCTCACTGACATCAAGATTGATATTAAGAGGATTCCCAAGAAGA
   ||      |  |    | |   |||  | |   | || | |   | || || |  |   |  || || |    |||    ||  | |  | |||  || |||| ||||| ||||| || || ||||| |||| ||| |||||||||||| ||||||| || ||||||||||||||||| || ||  |  | ||||||||||
tctagcaacctatctctgcgttgccttgattatttgtcttgctgtaattgattaatcaagcattcaagccct----catcgccttgttgcattctgtgaaccagGCACTTGTGGATGCCCCTGATATGGTCAGGTGCCAGGTGAACTTCAAGCGGCTCTCACTTACTGACATCAAGATTGACATCAAACGTGTCCCCAAGAAGA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31471998|gb|CD414026.1|CD414026
EST:     AAGAGTACGGGCGGCTCGTGATCATCGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|254326850|gb|GR836459.1|GR836459
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|193555544|gb|FK515989.1|FK515989
EST:     CGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: CGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|38193230|gb|CF922436.1|CF922436
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|24136609|gb|BU927119.1|BU927119
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|24135924|gb|BU926434.1|BU926434
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|254315545|gb|GR825354.1|GR825354
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|58014501|gb|CX701243.1|CX701243
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|298178145|gb|HO027528.1|HO027528
EST:     AAGAGTACGGGCGGCTCGTGTTCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|197664632|gb|FD480335.1|FD480335
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|15337362|gb|BI498018.1|BI498018
EST:     AGAGTTCGGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AGAGTAC-GGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|31305506|gb|CD390709.1|CD390709
EST:     GTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: GTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|254326849|gb|GR836458.1|GR836458
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|38192853|gb|CF922059.1|CF922059
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|7926603|gb|AW832629.1|AW832629
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|298180132|gb|HO025347.1|HO025347
EST:     AAGAGTACGGGCGGCACGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|31561538|gb|CD487376.1|CD487376
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|254315546|gb|GR825355.1|GR825355
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|192323615|gb|FK017481.1|FK017481
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|17401366|gb|BM178148.1|BM178148
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|58020030|gb|CX706772.1|CX706772
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|21677716|gb|BQ630067.1|BQ630067
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|254314672|gb|GR829665.1|GR829665
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|254314673|gb|GR829666.1|GR829666
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|254333691|gb|GR848609.1|GR848609
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|17963788|gb|BM270533.1|BM270533
EST:     GACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: GACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|254314132|gb|GR831761.1|GR831761
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|27446262|gb|CA953385.1|CA953385
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|9564391|gb|BE473900.1|BE473900
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|120533207|gb|EH261340.1|EH261340
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|254345484|gb|GR855874.1|GR855874
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|151397577|gb|EV267450.1|EV267450
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|31471511|gb|CD413539.1|CD413539
EST:     ATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: ATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|9987441|gb|BE661549.1|BE661549
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
EST: gi|38193664|gb|CF922870.1|CF922870
EST:     AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGG                         GCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG
genomic: AAGAGTACGGGCGGCTCGTGATCATTGTCGATGTCATTGACCAGAATAGGgtatgacctt ... ttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcgagtatttgatttcaaaaccatgtagcataatttttctaccatttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGGCTCTCGCTCACTGACATCAAGATTGATATTAAGAGGATTCCCAAGAAGA
      atttgat  putative branch site (score: 5)
                                 tttttctaccattt  putative PPT
     tatttgatttcaaaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gaggtgtagacattattgataagttgcatgtgcatgttacagctttcgagtatttgatttcaaaaccatgtagcataatttttctaccatttgttgacagGCTCTTGTTGATGCTCCCGACATGGTGAGGTCCCAAGTGAACTTCAAGAGGCTCTCGCTCACTGACATCAAGATTGATATTAAGAGGATTCCCAAGAAGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- ggtgtag
- - - - - - - - - - - - tgcatgt
- - - - - - - - - - - - - - - -gcatgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caaaacc