Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacacctttcttaccctaagtttgttttatttgcaatttttctctttcgtttctgaacctgttgtcgtgattataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTCTATGTCGATCCAGAGGCTAAGCTCTTGTTTATTGTTCGCATTCGTGG

Basic information

species Glycine max
transcript GLYMA08G23750.2
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G23750.2 (Glycine max), 3'ss of exon 2
lower sequence: AT2G01250.1 (Arabidopsis thaliana), 3'ss of exon 2
gtacacctttcttaccctaagtttgttttatttgcaatttttctctttcgtttctgaacctgttgtcgtgattataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTCTATGTCGATCCAGAGGCTAAGCTCTTGTTTATTGTTCGCATTCGTGG
||| || ||| |  ||   |  |     || ||| ||       || | |||     | ||  | |  |     | |||||||||||| |||||   ||||||||||||||||||||| || || || |||||||| || || || |||||||||||||| ||  | || || |||||
gtaaacatttttatcctccaaatacaaatacttggaaa------ctgtagtt----gatcttctcttttatccttgatagGAGAAGGAGTTGATCTCGTTGAAACGCGAGGCCAAGCTTAAGGGAGGTTTCTATGTTGACCCTGAAGCTAAGCTCTTGTTCATCATCCGTATCCGTGG

upper sequence: GLYMA08G23750.2 (Glycine max), 3'ss of exon 2
lower sequence: PP1S2_667V6.1 (Physcomitrella patens), 3'ss of exon 1
-------------------------------------gtacacctttctt-accctaagtttgtttta---tttgcaatttttctctttcgtttctgaacctgttgtcgtgattataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTCTATGTCGATCCAGAGGCTAAGCTCTTGTTTATTGTTCGCATTCGTGG
                                       |||   | |||  |   | | |||         ||    |||  |  ||| |  |        |||   |    |  |  |||||   ||  |||| ||  ||||  | || || |||||||| |||||||||||||| || || ||||| |||||| ||||| || |||| ||||||||
gtcagatgtgctgcgatgctcacagtcgatctggtggaaacagagtgctttgcatcagggttgccaaggggcttagggtttcacagtttggactgatgggtggttcctggatgtggagcagGAGTCTGATCTGATCCGACTGAAGAGAGAAGCGAAGCTGAAGGGTGGATTCTATGTGGAGCCTGAGGCCAAGCTCATGTTTGTTATTCGTATTCGTGG

upper sequence: GLYMA08G23750.2 (Glycine max), 3'ss of exon 2
lower sequence: PP1S243_40V6.1 (Physcomitrella patens), 3'ss of exon 1
-----------------gtacacct-ttcttaccctaagtttgtt-ttatttgcaatttttctctttcg-tttctgaacctgttgtcgtgattataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTCTATGTCGATCCAGAGGCTAAGCTCTTGTTTATTGTTCGCATTCGTGG
                 ||  | || ||| |||   || |  | | ||   |   || |||   | | |  ||||  |  | |   | |  |      |||| ||||| |||||    |||||  | ||||| |||||||| ||||||||||||||||| |||||| |||||||  ||||| |  | || || |||||
gtagtttttttgtgtgcgttaatctgttcatacgacaattgagctgttggctatgatgtttgattatggacttctctaattatgtccatactctctgcagGAAAAGGATTTGATCAATTTGAAGAGGGAGGCTAAGCTGAAGGGTGGATTCTATGTCGAGCCAGAGCCTAAGCTTATGTTTGTCATCCGTATCCGTGG

upper sequence: GLYMA08G23750.2 (Glycine max), 3'ss of exon 2
lower sequence: PP1S7_369V6.1 (Physcomitrella patens), 3'ss of exon 1
--gtacacctttcttacccta------------agtttgttttatt-----tgcaatttttctctttcgtttctgaacctgt--tgtcgtgattataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTCTATGTCGATCCAGAGGCTAAGCTCTTGTTTATTGTTCGCATTCGTGG
    ||   ||||||  | |             |||||||||| ||     ||| | ||   | ||| |||      |||     ||     || ||  ||||||||||||||||  | |||||  | ||||| ||||| || ||||||||||||||||| || ||| | |||||  ||||  | || || || |||||
ccacacgtatttcttggcatgtgcctccagggtagtttgttttgttgcccttgcgagttggatattttgttcgatctcctaaagcgtttctgttgta-cagGAGAAGGAATTGATAAGCTTGAAGAGGGAGGCTAAGCTCAAGGGTGGATTCTATGTCGAGCCTGAGCCCAAGCTTATGTTCGTCGTCCGTATCCGTGG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213617680|gb|DB959348.1|DB959348
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|209713367|gb|BW653864.1|BW653864
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACCATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|254325882|gb|GR838763.1|GR838763
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|26046005|gb|CA783377.1|CA783377
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|254347507|gb|GR853756.1|GR853756
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|151408828|gb|EV278636.1|EV278636
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|213600867|gb|DB968831.1|DB968831
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|192299043|gb|FG992834.1|FG992834
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|298190099|gb|HO032220.1|HO032220
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|254325881|gb|GR838762.1|GR838762
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|21602015|gb|BQ612346.1|BQ612346
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|298186333|gb|HO036966.1|HO036966
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|298167477|gb|HO012740.1|HO012740
EST:     AACTCATCTACAACAGAGCTAAGCGGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAACTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|213614186|gb|DB956798.1|DB956798
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|151404152|gb|EV273962.1|EV273962
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|192294789|gb|FG987478.1|FG987478
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|193555077|gb|FK515074.1|FK515074
EST:     GTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGACCAAGCTGAAAGGTGGATTC
genomic: GTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|15285859|gb|BI469750.1|BI469750
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|193492448|gb|FK454858.1|FK454858
EST:     GTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGACCAAGCTGAAAGGTGGATTC
genomic: GTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|213604903|gb|DB956306.1|DB956306
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|192294006|gb|FG987175.1|FG987175
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|209700311|gb|BW664537.1|BW664537
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|298169215|gb|HO020575.1|HO020575
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|209705304|gb|BW667975.1|BW667975
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|192298153|gb|FG991673.1|FG991673
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|213598951|gb|DB964526.1|DB964526
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|8284696|gb|BE022238.1|BE022238
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|193470827|gb|FK436894.1|FK436894
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTT
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTT
EST: gi|192296243|gb|FG991569.1|FG991569
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|10845839|gb|BF068880.1|BF068880
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|15664210|gb|BI701581.1|BI701581
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|209705404|gb|BW678521.1|BW678521
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|209701110|gb|BW652638.1|BW652638
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|17023798|gb|BM094832.1|BM094832
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|14258689|gb|BG881597.1|BG881597
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|298176382|gb|HO023083.1|HO023083
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCT-AGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|9564858|gb|BE474367.1|BE474367
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
EST: gi|151404236|gb|EV274046.1|EV274046
EST:     AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAG                         GAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC
genomic: AACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGgtacaccttt ... attataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttttatttgcaatttttctctttcgtttctgaacctgttgtcgtgattataatagGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGATTCTATGTCGATCCAGAGGCTAAGCTCTTGTTTATTGTTCGCATTCGTGG
                                           tgattataata  TA-rich tract