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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagttttttacttgttaaagtaatagggttcgtgtaaaaactcggtttttgaattgtttcgattgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA

Basic information

species Glycine max
transcript GLYMA08G21960.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os02g02130.1 (Oryza sativa), 3'ss of exon 2
-------------------gtaagttttttacttgttaaagtaatagggttcgtgtaa----aaactcggtt--tttgaattgtttcgat--tgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
                    ||| | | |   | | |   ||  | |  ||  | |        | | | ||  ||| ||||  | ||||    || |||| |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||  | |||||| | || |||||||||  |||||||||
tattgtttgtggttagcctttaaatctctagttagattctgtggttgaatttctttttttttggatttgcttagttttaatttctgcgatgtcatttcagACAACTGGAGCGTGAAGGCCATTAGGCGCAAGACCACAGGAACTGGAAGGATGAGGTACATGCGACATGTGCCTAGGAGGTTCAAGAGCAACTTCAGAGA

upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os08g03450.1 (Oryza sativa), 3'ss of exon 2
----------------gtaagttttttacttgttaaagtaatagggttcgtgtaa-------aaactcggtt--tttgaattgtttcgat--tgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
                 ||| | | |   | | |   ||  | |  ||  | |           | | | ||  ||| ||||  | ||||    || |||| |||||||||||||||||||||||| | |||||||| ||||| ||||||||||||||| ||||  | |||||| | || |||||||||  |||||||||
tgtttgtggttagcctctaaatctctagttagattctgtggttgaatttcttttgtctttttggatttgcttagttttaatttctgcgatgtcatttcagACAACTGGAGCGTGAAGGCCATTAGGCGCAAGACCACAGGAACCGGAAGGATGAGGTACATGCGACATGTGCCTAGGAGGTTCAAGAGCAACTTCAGAGA

upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os02g56990.1 (Oryza sativa), 3'ss of exon 2
---gtaagttttttacttgttaaagt--aatagggttcgtgtaaaaactcggtt------tttgaattgtttcgattgttcc----------------agATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
    |   | ||||  ||| | ||||   ||||  |  |   |    ||| | |      ||   | |  || |||| || |                ||| |||||||| ||||||||||| ||||| |||||||| |||||||| |||||||||||| | ||  |||||||    || ||||||||   |||||||||
tctcttgctgttttcattgatgaagtttgatagaatctgctcagctcctctgatatgtagttctgactactttgattctttctcgaaatttgaaacacagACAACTGGAGTGTGAAGGCCATCAGGAGGAAGACCACTGGAACTGGGAGGATGAGGTACCTTCGCCACGTGCCCAAGAGGTTCAAGAGTAACTTCAGAGA

upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G077991_T02 (Zea mays), 3'ss of exon 2
-----------------------gtaagttttttacttg--ttaaagtaatagggtt-cgtgtaaaaactcggtttttgaattgtt-tcgattgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
                        ||  |   || ||||  | ||  | |||   |  | || |  |||||  | ||   || ||  || | |||| ||||||||||||| ||||||||||| ||| | ||||| ||||| || ||||||||||||||| ||||  ||||||||||| | |||||||||  |||||||||
aaatctgaaacctagttttaggattatatgccttgcttgattcaacttcatattctaacctgaatgaactcaatgttaacatagtggtccactgtttcagATAACTGGAGTGTGAAGGCCATCAGGCGCAAGACAACCGGTACCGGAAGGATGAGGTACATGCGCCACGTGCCTCGCCGTTTCAAGAGCAACTTCAGAGA

upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G168674_T02 (Zea mays), 3'ss of exon 1
------------------gtaagttttttacttgttaaagtaatagggttcg---------tgtaaaaactcggtttttgaattgtt-tcgattgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
                   |||   || | |   || || | ||| |  | |         || |  |  ||  | ||   |||||  || |   || ||||||| ||||| ||||||||||| ||| | |||||||| || || ||||||||||||||| ||||  ||||||||||| | |||||||||  |||||||||
attggaaatcttgtgatcataacccttgttcg-attcaacttatatgtcttgctccaaacctggatgagttcaatgttaacattgtggtccacaatttcagATAATTGGAGTGTGAAGGCCATCAGGCGCAAGACCACTGGTACGGGAAGGATGAGGTACATGCGACACGTGCCTCGCCGTTTCAAGAGCAACTTCAGAGA

upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: AT3G16080.1 (Arabidopsis thaliana), 3'ss of exon 2
------------gtaagttt---tttacttgttaaagtaatagggttcgtgtaaa---aactcggtttttgaa--------ttgtttcgattgttc-cagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
             |  | ||   || | | |||  | |   |||| |  | ||     |  || || | |||         |||| ||  | |||  |||| |||||||| ||||||||||| ||||| ||||| || || || ||||||||||||||  | ||||| || |||||  | |||||||  || ||||||||
gttctttaatgtctttgcttcaattgattggttggaatttgagggattatctatgttcatttctgtctctgagctcaattcttgtctctttggttaacagACAACTGGAGTGTGAAGGCCATCAGGAGGAAGACTACTGGTACCGGAAGGATGAGGTATCTCCGTAATGTTCCTCGTCGGTTCAAGACTGGATTCAGAGA

upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: AT1G15250.1 (Arabidopsis thaliana), 3'ss of exon 2
----------------------------------gtaagttttttacttgttaaagt-aatagggttcgtgtaaaaactcggtttttgaattgtttcgattgt-tccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
                                  | || |||    ||  | |  |  ||| ||     | | |||     ||  | |||||  |    |||| | ||||||||||||| |||||||| || || |||||||| || |||||||| |||||||||||  | ||||| || ||||| || |||||||   |||| |||||
gtatgtactctctctctatttctgtctctgtcttggaattttgggtctgatcatggagaattggagatatatgaaag---agtcctggaatttatgattttgtgtgcagATAACTGGAGTGTGAAGGCAATAAGAAGAAAGACAACAGGAACTGGTAGGATGAGGTATCTCCGTAATGTCCCTCGAAGGTTCAAGACTTGCTTTAGAGA

upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: AT1G52300.1 (Arabidopsis thaliana), 3'ss of exon 2
----------------------gtaa-gttttttacttgttaaagtaatagggttcgtgtaaaaactcggtttt---tgaattgttt--cgattgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
                      | |  || || ||||    ||  |  ||     | | |   || | | || |   |||  ||| |   |||  |   ||| |||||||| |||||||| ||  | |||||||| || ||||||||||||||||||||  | || || ||||||||||| ||||||| ||| ||||||||
ttctctttttctcatgtaaatggcactgtcttctactcag-aattttttatatgccatttgtgaatttgtttctaattgatgtgtataatgatgttggtagACAACTGGAGTGTGAAGGCAATCCGTAGAAAGACTACTGGAACTGGAAGGATGAGGTATCTTCGCAATGTGCCTCGCAGGTTCAAGACCGGTTTCAGAGA

upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S152_133V6.1 (Physcomitrella patens), 3'ss of exon 2
-------------------------gtaagttttttact--tgttaaagtaatagggttcgtgtaaaaactcggtttttgaattgtttcgattgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
                           |  ||  |||    || | |   ||| |  ||       | | |       |             || | |||||||||||||||||||||| |||||||||||||| || ||||| ||| | ||| |  || | ||  |  | || ||||| |||   | |   ||||||||
ggatggagggtctcatgttgagccgacatcttccttagcactggtcatacaatggtattttctcgtatattacacacatctgactccaaagatgcttcagATAACTGGAGCGTGAAGGCTATTAGGAGAAAGACAACTGGAACGGGACGCATGCGTCACCTTCGCCATCTTCCCCGCAGGTTCTCTAACAATTTCAGAGA

upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S475_18V6.1 (Physcomitrella patens), 3'ss of exon 2
------------------gtaagttttttacttgttaaagtaatagggtt----cgtgtaaaaact--cggtttttgaattgtttcgatt---gttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
                   |||   ||||| || |||| | |  | |  |     ||  ||  |    | || |   | || |||  |||   || ||||| || |||||||||||||| || ||||| ||||| |||||||||||| | ||| |  || ||||| |  | || ||  ||||    | |   ||||||||
agaaatttagaacgcaacataaaaattttagttcttaatgaaccacgaatgaattgttcaaggatcaactgtctcatagttcttttaattcatgtcccagACAATTGGAGCGTGAAGGCTATCAGGAGGAAGACTACCGGAACTGGACGTATGCGCCACCTGCGTCATCTTCCCCGTCGATTTTCTAACAATTTCAGAGA

upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S222_87V6.1 (Physcomitrella patens), 3'ss of exon 2
-----------------------gtaagttttt-tacttgttaaagtaatagggttcgtgtaaaaactcggtttttgaattgtttc---gattgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
                       | |  ||| | ||    |    ||  ||   |  |  |      |   ||| | |     |||   || || | |||||||||||||||||||||| |||||||| |||||||| ||||| ||| | ||| |  |  | ||  |  | || |||||||||   | |   ||||||||
ggatttttgggtttgacgcgtcagaatctttctgtagcactctctgttctacaataagcctgtcccttttctttgtaaccaaattcagagaatgctgcagATAACTGGAGCGTGAAGGCTATTAGGAGGAAGACCACTGGAACGGGACGCATGCGTCATCTTCGCCATCTTCCCCGCAGATTCTCTAACAATTTCAGAGA

upper sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S83_87V6.1 (Physcomitrella patens), 3'ss of exon 2
-------------------------gtaagttttttacttgttaaagtaatagggttcgtgtaaaaactcggtttt--tgaattgtttcgattgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
                          |  |  | ||   | ||  ||| |  |  || || |    ||  |   ||  || |   |||   ||  | |||||||||||||||||||||||||||| || || ||||| ||||| ||  | ||| |  |  | ||  || | ||||| || ||||  | |   ||||||||
gacttcttttccacaatttggcatcatttgcatgttgtatttttcagtgaatgttttggtattgtgaccagacgttgatgcagaatttgagttcgtgcagATAACTGGAGCGTGAAGGCCATTAGAAGGAAAACCACTGGAACAGGGCGCATGCGCCATCTTCGCCACCTTCCTCGTAGGTTCAGTAACAATTTCAGAGA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6913848|gb|AW395378.1|AW395378
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|20448773|gb|BQ252897.1|BQ252897
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|9204421|gb|BE330645.1|BE330645
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|21601995|gb|BQ612326.1|BQ612326
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|208313883|gb|GE114269.1|GE114269
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|6724625|gb|AW309080.1|AW309080
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|8403333|gb|BE058967.1|BE058967
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|10233903|gb|BE802791.1|BE802791
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTANGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|6072440|gb|AW101827.1|AW101827
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|208113069|gb|GD912444.1|GD912444
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|58017330|gb|CX704072.1|CX704072
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|16348733|gb|BI974328.1|BI974328
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTATGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|4397178|gb|AI496175.1|AI496175
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGNAGCGTGAAGGCCATTAGGAGAAAGACCACCGGA-CTGGAAGG
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGG-AGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGG
EST: gi|151413140|gb|EV282948.1|EV282948
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|193304799|gb|FK271710.1|FK271710
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGACCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|7042278|gb|AW472172.1|AW472172
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|120533956|gb|EH262089.1|EH262089
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|192329933|gb|FK021519.1|FK021519
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|254339315|gb|GR848032.1|GR848032
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|4313644|gb|AI460763.1|AI460763
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|193693526|gb|FK631652.1|FK631652
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGG
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGG
EST: gi|8669226|gb|BE190333.1|BE190333
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|208287078|gb|GE082208.1|GE082208
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|21285826|gb|BQ473697.1|BQ473697
EST:     CGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: CGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|4283854|gb|AI440708.1|AI440708
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|214004084|gb|DB984990.1|DB984990
EST:     GATGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGC-TGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|7796363|gb|AW781760.1|AW781760
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|298171960|gb|HO021552.1|HO021552
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTCACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|261497064|gb|GT185239.1|GT185239
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|254314598|gb|GR829591.1|GR829591
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|16349366|gb|BI974961.1|BI974961
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|8669216|gb|BE190323.1|BE190323
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|18041511|gb|BM309805.1|BM309805
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|41145783|gb|CK605994.1|CK605994
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|58023390|gb|CX710131.1|CX710131
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTATGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|31561769|gb|CD487607.1|CD487607
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|192324185|gb|FK017916.1|FK017916
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|192327425|gb|FK017812.1|FK017812
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|6072934|gb|AW102321.1|AW102321
EST:     GCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|7147177|gb|AW509099.1|AW509099
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|7284278|gb|AW596873.1|AW596873
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|31471376|gb|CD413404.1|CD413404
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|213619464|gb|DB967738.1|DB967738
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGC-TGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|207752991|gb|GD725529.1|GD725529
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|207715879|gb|GD697983.1|GD697983
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTTGGTAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAG
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACT-GG-AGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAG
EST: gi|10253493|gb|BE821259.1|BE821259
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|192308745|gb|FK000107.1|FK000107
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|33387492|gb|CA850699.1|CA850699
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|7029737|gb|AW459520.1|AW459520
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|192333997|gb|FK024810.1|FK024810
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|208267017|gb|GE061026.1|GE061026
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|208220825|gb|GE018535.1|GE018535
EST:     GAAGNGTCGTTGCCCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|193662412|gb|FK606084.1|FK606084
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|193690999|gb|FK627086.1|FK627086
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGATAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|17964609|gb|BM271342.1|BM271342
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|193488958|gb|FK453323.1|FK453323
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|213596007|gb|DB956015.1|DB956015
EST:     AAGAAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: AAG-AGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|4291574|gb|AI441781.1|AI441781
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|16342263|gb|BI967858.1|BI967858
EST:     GCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|193639356|gb|FK586143.1|FK586143
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGATAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|208330406|gb|GE132267.1|GE132267
EST:     GAAGAGTCGTTGCCCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|20207558|gb|BQ133647.1|BQ133647
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|254327328|gb|GR836937.1|GR836937
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|151406045|gb|EV275860.1|EV275860
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATCAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|192323679|gb|FK015985.1|FK015985
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACTACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|13563471|gb|BG551691.1|BG551691
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|192329934|gb|FK021520.1|FK021520
EST:     GAAGAGTCGTTGCTTTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|19936266|gb|BQ080791.1|BQ080791
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|193517050|gb|FK476104.1|FK476104
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
EST: gi|6481867|gb|AW201138.1|AW201138
EST:     GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAAT                         ATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA
genomic: GAAGAGTCGTTGCTCTGCGTGCGCTTACCCCGCTGCGCGCACCAGGAAATgtaagttttt ... attgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaagtaatagggttcgtgtaaaaactcggtttttgaattgtttcgattgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA
                                              ttgttcc  CT-rich tract
                             tttttgaattgttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaagttttttacttgttaaagtaatagggttcgtgtaaaaactcggtttttgaattgtttcgattgttccagATAACTGGAGCGTGAAGGCCATTAGGAGAAAGACCACCGGAACTGGAAGGATGAGGTACTTGCGTAACGTGCCTCGCAGATTCAAGAGCGGCTTCAGAGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT