Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaggttttattcacacttttcttttttactttttgatatcgatacttgttattcgctaaaacgacggcgtttgtggtctctttcaatctgagccccccacttttttttcttatcgtttttcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG

Basic information

species Glycine max
transcript GLYMA08G10910.2
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G10910.2 (Glycine max), 3'ss of exon 2
lower sequence: AT1G67430.2 (Arabidopsis thaliana), 3'ss of exon 2
gtaggttttattcacacttttcttttttactttttgatatcgatacttgttattcgctaaaacgacggcgtttgtggtctctttcaatctgagccccccacttttttttcttatcgtttttcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
                                           ||  |     ||  |  | | ||    ||  | ||  | ||   |         |    |  |  || | | |||||   |||||||||||||||||||||||  |||| ||||||||||| || |||
------------------------------------------gtaagtaaagctccttgtatcaac----ttcttagtaccatttcgttgttttgatctttgtggtaatcctttggttttgattttgcagCTTGCAAGGCTAGAGGATCCGATCTTAGGGTTCACTTCAAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298180950|gb|HO022389.1|HO022389
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTTATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|8827548|gb|BE211278.1|BE211278
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|192311078|gb|FK004753.1|FK004753
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298163564|gb|HO012297.1|HO012297
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|151396569|gb|EV266446.1|EV266446
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|4293582|gb|AI442068.1|AI442068
EST:     ATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: ATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|193593708|gb|FK547584.1|FK547584
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAA
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAA
EST: gi|298163269|gb|HO012002.1|HO012002
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGATAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|209710236|gb|BW658932.1|BW658932
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|192311077|gb|FK004752.1|FK004752
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298163590|gb|HO012323.1|HO012323
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGC                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298191555|gb|HO039034.1|HO039034
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|13789287|gb|BG651878.1|BG651878
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298187459|gb|HO034608.1|HO034608
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|7795640|gb|AW781037.1|AW781037
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|208235857|gb|GE033333.1|GE033333
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|192334610|gb|FK025185.1|FK025185
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|13311603|gb|BG405254.1|BG405254
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|193573449|gb|FK530144.1|FK530144
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|19269677|gb|BM885933.1|BM885933
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|5606061|gb|AI900159.1|AI900159
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|23729429|gb|BU762800.1|BU762800
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|209710235|gb|BW658931.1|BW658931
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|8404300|gb|BE059934.1|BE059934
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|193653715|gb|FK598243.1|FK598243
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCA-GGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|9204377|gb|BE330601.1|BE330601
EST:     AATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: AATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|15201820|gb|BI425076.1|BI425076
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|24206126|gb|BU965379.1|BU965379
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|7234136|gb|AW569476.1|AW569476
EST:     AAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: AAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|13788094|gb|BG650686.1|BG650686
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|193628633|gb|FK577217.1|FK577217
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|10845617|gb|BF068696.1|BF068696
EST:     GGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|192315677|gb|FK011145.1|FK011145
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|10843484|gb|BF066782.1|BF066782
EST:     GGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAAGGTTCATTTTAAG
genomic: GGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|18735395|gb|BM528740.1|BM528740
EST:     CAATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: CAATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|16106216|gb|BI893956.1|BI893956
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|192330491|gb|FK021222.1|FK021222
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298168677|gb|HO009607.1|HO009607
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298191131|gb|HO038610.1|HO038610
EST:     GTGAAGTACTTAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|4396527|gb|AI495524.1|AI495524
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|15662172|gb|BI699543.1|BI699543
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|21285671|gb|BQ473542.1|BQ473542
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|151402923|gb|EV272736.1|EV272736
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298165423|gb|HO011472.1|HO011472
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|18692893|gb|BM521741.1|BM521741
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|16347631|gb|BI973226.1|BI973226
EST:     GCCGCAATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GCCGCAATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|21887359|gb|BQ740572.1|BQ740572
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298167044|gb|HO010483.1|HO010483
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|22541284|gb|BU091127.1|BU091127
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298170950|gb|HO015926.1|HO015926
EST:     GTGAAGTACTCAAGGGAGCCTGTCAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|14990642|gb|BI316315.1|BI316315
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|209715180|gb|BW665657.1|BW665657
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|193327221|gb|FK292444.1|FK292444
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|192300035|gb|FG991853.1|FG991853
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298185504|gb|HO030717.1|HO030717
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|192318825|gb|FK011439.1|FK011439
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|12688125|gb|BG154461.1|BG154461
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|209728753|gb|BW655433.1|BW655433
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|38192672|gb|CF921878.1|CF921878
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298169553|gb|HO020913.1|HO020913
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298165134|gb|HO011183.1|HO011183
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|58018390|gb|CX705132.1|CX705132
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|9204127|gb|BE330351.1|BE330351
EST:     GCAATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GCAATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298169605|gb|HO020965.1|HO020965
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298166225|gb|HO009196.1|HO009196
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|7590615|gb|AW706363.1|AW706363
EST:     GCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298185551|gb|HO030764.1|HO030764
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|16347772|gb|BI973367.1|BI973367
EST:     GTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298176850|gb|HO026857.1|HO026857
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298175074|gb|HO018069.1|HO018069
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|213607231|gb|DB965117.1|DB965117
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|6566246|gb|AW233927.1|AW233927
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298170710|gb|HO015686.1|HO015686
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298186622|gb|HO037255.1|HO037255
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|298172232|gb|HO021824.1|HO021824
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|192330082|gb|FK020898.1|FK020898
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|207693823|gb|GD676350.1|GD676350
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
EST: gi|209728752|gb|BW655432.1|BW655432
EST:     GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGT                         CTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
genomic: GTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTgtaggtttta ... tcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggtctctttcaatctgagccccccacttttttttcttatcgtttttcatttgcagCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAG
                  ccccccactttttttt  CT-rich tract
                        acttttttttcttat  TA-rich tract