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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaggtgccttagaatttcattggggttacgtctcgttgaagaatgaatcttaccttcttttttcttaatgtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC

Basic information

species Glycine max
transcript GLYMA08G02070.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G02070.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os04g35090.1 (Oryza sativa), 3'ss of exon 2
--------------gtaggt---gccttagaatttcattggggttacgtctcgttgaagaatgaatcttacctt---cttttttcttaatgtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
              ||  ||   || || | ||  ||   || | |           |   |   |  |   ||   |||  |   |  ||| | ||||||||||||    | ||| |||||||||| |||  |||||||||||||  |||| || |||||||| ||||||||||| ||||| |||||||| ||||||||
cgctgttggtgtatgtcagtacagcgttcgcatgccaagaggctcaaactgaaagtgattgtaggtgctggttttaacttggtgtatgctgttgttgcagAGGGAGTGCTGTATGCCAAGAAGGACTACAACCTGGCGAAGCACCCGCAGATCGATGTGCCGAACCTGCAGGTGATCAAGCTCATGCAGAGCTTCAAGTC

upper sequence: GLYMA08G02070.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os01g73160.1 (Oryza sativa), 3'ss of exon 2
-----------------------gtaggtgccttagaatttcattggggttacgtctcgttgaagaatgaatcttaccttcttttttcttaatgtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
                       |||  ||| | |     | | ||  | ||| | |  |||    |||| |   |       |||  || |  |   |||||||||||| |  | ||| |||||||||| |||  |||| ||||||||  || |||| ||||| ||  || ||||||||||||| |||||||| ||||||||
acatgttttatttgattggtcatgtatttgc-tgaaggcctgaatgatggtacctttatttgtt--atgagttgaagtgctaatttaattcaactatatgcagAGGGAGTCTTGTATGCCAAGAAGGACTACAACCTGGCCAAGCACCCAAAGGTTGATGTGCCCAACTTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTC

upper sequence: GLYMA08G02070.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G050925_T01 (Zea mays), 3'ss of exon 2
-----------gtaggtgccttagaatttcattggggttacgtctcgttgaagaatgaatct-tac--cttcttttttcttaatgt------cggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
            |   |  |  ||||||  |     | |  |    | ||     |   |   |||   |||| ||   || ||||       | ||||||||| ||    | ||| |||||||||| |||  |||||||||||||  ||||||| ||||| || || |||||||| ||||| |||||||| ||||||||
gttctatgtatatccatcaccgagaattgaaagcatggtctgatgtgatgtgtgctatgttcatacggtttctgttagtttgatgtgtttgctgctgcagAGGGCGTGCTGTATGCCAAGAAGGACTACAACCTGGCGAAGCACCCACAGATTGATGTGCCCAACCTCCAGGTGATCAAGCTCATGCAGAGCTTCAAGTC

upper sequence: GLYMA08G02070.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G171484_T01 (Zea mays), 3'ss of exon 2
-------------------------------------------------------------------------------------------------gtaggtgccttagaatttcattggggttacgtctcgttgaagaatgaatcttaccttcttttttcttaatgtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
                                                                                                  |||     || | ||    |  |    | | | |||    |  | |   | |    | ||   ||| ||||   ||||||||| |||   | ||| |||||||||| |||  |||| ||||||||  || |||||||||| || ||| ||||||||||||| |||||||| ||||||||
gtgagctccttctcctccctcttcgcccgtccccctaggcgcgcccaatataagattatttcattagatttagataccaattcagacattacaagcattagcaatattcggatcgtgtacgacccaagcc-cgtccttgtcttagattgagaaccgttcaactttatgt---tgcagAGGGGGTTCTATATGCCAAGAAGGACTACAACCTGGCCAAGCACCCCAAGCTTGACGTGCCCAACCTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTC

upper sequence: GLYMA08G02070.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G065237_T01 (Zea mays), 3'ss of exon 2
---------gtaggtgccttagaat-----ttcattggggttacgtctcgttgaagaatgaatcttac--cttcttttttcttaatgt------cggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
          |  |  ||||| | |     ||| |||   | || |     ||    |||  || |||   |||| ||   || ||||       | ||||||||| ||    | ||| |||||||||| |||  |||||||||||||  |||| || ||||| || || |||||||| ||||| |||||||| || |||||
tccaaatttatttgccccttaaactatggattccttgttat-acattcatctgcgttatgt-tcatacgatttctgttagtttgatgtatttgctgctgcagAGGGCGTGCTGTATGCCAAGAAGGACTACAACCTGGCGAAGCACCCGCAGATCGATGTGCCCAACCTCCAGGTGATCAAGCTCATGCAGAGCTTTAAGTC

upper sequence: GLYMA08G02070.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G043737_T01 (Zea mays), 3'ss of exon 2
-------------------------gtaggtgccttagaatttcattggggttacgtctcgttgaagaatgaatcttaccttcttttttcttaatgtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
                          | | | ||||   ||  ||||     | |||   ||| | |     || |    |  |||  | |   ||  | ||||||||| ||    | ||| |||||||||| |||  |||||||||||||  |||| || ||||| || || |||||||| ||||| |||||||| || |||||
tccaaatttatttgccccctaaactatggattccttgttata-cattcat-ctgcgttatgttcatgcg---atttctgttagtttgatgtatttgctgctgcagAGGGCGTGCTGTATGCCAAGAAGGACTACAACCTGGCGAAGCACCCGCAGATCGATGTGCCCAACCTCCAGGTGATCAAGCTCATGCAGAGCTTTAAGTC

upper sequence: GLYMA08G02070.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G446960_T01 (Zea mays), 3'ss of exon 2
--------------gtaggtgccttagaatttcattgg-----ggttacgtctcgttgaagaatgaatct-taccttcttttttcttaatgtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
               |||     || | |||   |  |      |||    || |||  ||  ||||  | ||  |     | | | | |   ||||||||||| || |  |  || |||||||||| |||  |||| ||||||||  || |||| ||||| ||  || ||||||||||||| |||||||| ||||||||
agacattatacgcattagcaatattcgtattatgtacgaccctagtttatccttgttttaggttgaaggtatatgtaaaactgtttaacttatggtgcagAGGGGGTCTTGTACGCCAAGAAGGACTACAACCTGGCCAAGCACCCCAAGCTTGATGTGCCCAACTTGGAGGTGATTAAGCTCATGCAGAGCTTCAAGTC

upper sequence: GLYMA08G02070.1 (Glycine max), 3'ss of exon 2
lower sequence: AT5G52650.1 (Arabidopsis thaliana), 3'ss of exon 2
-------------------------------------------------------------------------------------------------------------gtaggtgccttagaatttcattggggttacg---tctcg-ttgaagaatgaatcttaccttcttttt------tcttaatgtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
                                                                                                              |||||    |||  | |  | |   ||| |   | | | ||  |   ||||  ||   ||  || |      |  ||   |   |||||| ||||||||||||||||||||||| |||||| | || ||||| ||   ||| || || || || || || ||||||||||| |||||||||||||| ||
gttcgttcttcttaaatttgttcttagatctctgttttcttcagcttctgtgagtaaattgattcatttttaggcttatgccgatgaacattgtgatttttgaactagtttaggttaactagt-tatggtagcaattatgatgtttggcttagaaggtgaacattgtgttgattatcatatgttctatgatttttgcagAAGGAGTTTGCTTTGCGAAGAAGGATTTCAATCTTGCTAAGCATCCGTTGATCGATGTCCCCAACCTACAAGTGATTAAGCTTATGCAGAGTTTCAAATC

upper sequence: GLYMA08G02070.1 (Glycine max), 3'ss of exon 2
lower sequence: AT4G25740.2 (Arabidopsis thaliana), 3'ss of exon 2
---------gtaggtgccttagaattt--cattggggtta--cgtctcgttgaagaat------gaatcttaccttcttttttcttaatgtcggt-gcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
          |  | |  |||  || |   | ||   | |   |||| |   ||||||      | ||  ||  |  |  | ||||| ||    | | ||||||||| |||||||| |||||||| |||||| |  | ||||| ||   |||||| || || || ||||| ||||||||||| |||||||||||||||||
atataactgttgagggatttattatctagtactgtactcagttgtctagagaaagaatttgtgtggatactaaatgatcatatcttactgggtttcgtagAGGGAGTATGCTTTGCTAAGAAGGATTTCAATCTCCCAAAGCATCCGTTGATTGATGTACCAAACCTGCAAGTGATTAAGCTCATGCAGAGTTTCAAGTC

upper sequence: GLYMA08G02070.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv02s0025g00310.t01 (Vitis vinifera), 3'ss of exon 2
--------------------------gtaggtgccttagaatttcattggggttacgtctcg---ttgaagaatgaatcttaccttcttttttcttaatgtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
                            | |       |   |||| || | | | || |     ||     ||  || |||  |  |||||||||  |   | | ||||||||||||||| |||||| ||||||| |||| | ||||| || || || || || || |||||||||||||| || ||| |||||||||| ||||||||
gtatcttacttattctctcactttaaccacgatttgctgtgattcagtgtgttcatgtttttattttattttattgattttatata-ttttttcttgtt--tgcttcagAGGGAGTTTGCTATGCGAAAAAGGACTACAATCTCGCGAAACATCCCGATATCGATGTCCCGAATCTGCAGGTTATCAAGTTGATGCAGAGCTTCAAGTC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298193467|gb|HO033901.1|HO033901
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|6914384|gb|AW395914.1|AW395914
EST:     GCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: GCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|207706753|gb|GD687595.1|GD687595
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAA
EST: gi|298170975|gb|HO015951.1|HO015951
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298195583|gb|HO043974.1|HO043974
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACCTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|42722787|gb|CK768686.1|CK768686
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|209708678|gb|BW678855.1|BW678855
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298165121|gb|HO011170.1|HO011170
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|207836026|gb|GD806051.1|GD806051
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGGCTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298172550|gb|HO019590.1|HO019590
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298186242|gb|HO036875.1|HO036875
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|151409707|gb|EV279515.1|EV279515
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|193358108|gb|FK319708.1|FK319708
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGACGAAGAAGGACTTCAATTTGGCGAAGCACCC
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTG-CGAAGAAGGACTTCAATTTGGCGAAGCACCC
EST: gi|298170463|gb|HO019087.1|HO019087
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTCTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|209704547|gb|BW673372.1|BW673372
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|37996833|gb|CF808422.1|CF808422
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|209700931|gb|BW661310.1|BW661310
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208228915|gb|GE024279.1|GE024279
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGAC
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGAC
EST: gi|298181146|gb|HO022585.1|HO022585
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|193703023|gb|FK639245.1|FK639245
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAACACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208127613|gb|GD924855.1|GD924855
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGACTTTGCGAAGAAGGAC
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTG-CTTTGCGAAGAAGGAC
EST: gi|192319208|gb|FK009120.1|FK009120
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208232617|gb|GE033196.1|GE033196
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|209708670|gb|BW678847.1|BW678847
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|193410132|gb|FK372955.1|FK372955
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCC
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCC
EST: gi|193641896|gb|FK590678.1|FK590678
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298184743|gb|HO029956.1|HO029956
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|213593071|gb|DB969869.1|DB969869
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|38191054|gb|CF920260.1|CF920260
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|151411093|gb|EV280904.1|EV280904
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|207775815|gb|GD748590.1|GD748590
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAAG
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGA-G
EST: gi|21600525|gb|BQ610856.1|BQ610856
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|254334024|gb|GR848942.1|GR848942
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|6502150|gb|AW203523.1|AW203523
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|213587018|gb|DB961755.1|DB961755
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|151410443|gb|EV280258.1|EV280258
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208219269|gb|GE018407.1|GE018407
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|4313771|gb|AI460890.1|AI460890
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|193556832|gb|FK513973.1|FK513973
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208140877|gb|GD935681.1|GD935681
EST:     AGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: AGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|213611148|gb|DB972708.1|DB972708
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|21888611|gb|BQ741824.1|BQ741824
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|7042697|gb|AW472591.1|AW472591
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|193715733|gb|FK648980.1|FK648980
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCCGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298173386|gb|HO016722.1|HO016722
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|213611703|gb|DB969091.1|DB969091
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|193682804|gb|FK623832.1|FK623832
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|192311617|gb|FK004858.1|FK004858
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208318211|gb|GE110230.1|GE110230
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|10237762|gb|BE806650.1|BE806650
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298163692|gb|HO012425.1|HO012425
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208262004|gb|GE058357.1|GE058357
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|14990925|gb|BI316598.1|BI316598
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208262067|gb|GE058714.1|GE058714
EST:     CCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: CCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|193619157|gb|FK568967.1|FK568967
EST:     GATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: GATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298167669|gb|HO012932.1|HO012932
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208198855|gb|GD998536.1|GD998536
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|151407984|gb|EV277799.1|EV277799
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|9986827|gb|BE660935.1|BE660935
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|192311616|gb|FK004857.1|FK004857
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|151408864|gb|EV278672.1|EV278672
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208085496|gb|GD884508.1|GD884508
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGNGTTTGCTTTGCGAAGAAGGAC
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGAC
EST: gi|22540870|gb|BU090713.1|BU090713
EST:     GGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: GGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|151400350|gb|EV270164.1|EV270164
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCAAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298183899|gb|HO029112.1|HO029112
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|213605571|gb|DB970700.1|DB970700
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|207727320|gb|GD705726.1|GD705726
EST:     GATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: GATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|192319514|gb|FK009496.1|FK009496
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|209702028|gb|BW652320.1|BW652320
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|207847671|gb|GD818696.1|GD818696
EST:     ATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|20075385|gb|BQ094168.1|BQ094168
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|193546797|gb|FK500482.1|FK500482
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|193677512|gb|FK619684.1|FK619684
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208333638|gb|GE129539.1|GE129539
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|12773925|gb|BG238852.1|BG238852
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|4304473|gb|AI443624.1|AI443624
EST:     CTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: CTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298183720|gb|HO028933.1|HO028933
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|208337740|gb|GE134296.1|GE134296
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|151412516|gb|EV282328.1|EV282328
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|193516259|gb|FK472499.1|FK472499
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|254334023|gb|GR848941.1|GR848941
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|10234350|gb|BE803238.1|BE803238
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAT                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298183167|gb|HO028430.1|HO028430
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298171993|gb|HO021585.1|HO021585
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|298167153|gb|HO010592.1|HO010592
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAGATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
EST: gi|193652855|gb|FK599973.1|FK599973
EST:     ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAG                         AGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA
genomic: ATCATTCCTGAGAAGAACCGCAAGGAGATCTGCAAATACCTCTTCCAAGgtaggtgcct ... gtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gttacgtctcgttgaagaatgaatcttaccttcttttttcttaatgtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC
                                      tcttaat  putative branch site (score: 3)
                              ttcttttttcttaat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaggtgccttagaatttcattggggttacgtctcgttgaagaatgaatcttaccttcttttttcttaatgtcggtgcagAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGAT