Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgtattctttcccactacaatattgcttattcattccactaatttggtttataaatggctatattctgactttgtaattaatgtggttaatgtatgatgctatgatataataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG

Basic information

species Glycine max
transcript GLYMA08G01860.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA08G01860.1 (Glycine max), 3'ss of exon 2
lower sequence: LOC_Os04g47220.1 (Oryza sativa), 3'ss of exon 1
gtatgtattctttcccactacaatattgcttattcattccactaatttggtttataaatggctatattctgactttgtaattaatg--tggttaatgtatgatgctatgatataataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                  ||  |||     || | | | || |||   | || | | ||||   |||| | ||| | |  | | ||  || ||  ||| | |   |  |  ||  |      ||||  | || ||||| || || || ||||| ||||||||||| ||| |||| ||||| |||||||| || || ||||| |||||||| ||||| || || |
----------------gttagtataccaactact-actgcagtaaa--gattcagagatggaagtatttttactgttttctgagtgattgatttttgttttaatttgcgcgatctt--ccacagATCCTTGCCCCACTGCCAATCGGGTTTGCGGTGTTCTTGGTTCACCTGGCCACCATCCCCATCACCGGCACCGGCATCAACCCAGCGAGGAGCCTTGGCG

upper sequence: GLYMA08G01860.1 (Glycine max), 3'ss of exon 2
lower sequence: AC209208.3_FGT002 (Zea mays), 3'ss of exon 2
gtatgtattctttcccactacaatattgcttattcattccactaatttggtttataaatggctatattctgactttgtaattaatgtggttaatgtatgatgctatgatataataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
            |    | |||| ||||   ||  || |      || | |  |||          || | |  ||||  ||||        ||| ||||  |  | || |  | |    ||||  | || ||||| || ||||| || || |||||| |||||||| | || ||||| ||||| || || |||||||| |||||||||||||| || || |
-----------gtgtttcaacaa-attgaaaatgtatgcatactcttcgatacatat---------ttttcatattgtg-ttaagacttacgatgaatgaaacccttatttggtgaaaacagATCCTTGCCCCACTGCCAATTGGGTTCGCGGTGTTCCTGGTCCACCTTGCCACCATCCCCATTACTGGCACTGGCATCAACCCAGCTAGGAGCCTTGGCG

upper sequence: GLYMA08G01860.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv15s0046g02410.t01 (Vitis vinifera), 3'ss of exon 2
gtatgtattctttcccactacaatattgcttattcattccactaatttggtttataaatggctat-attctgactttgtaattaatgtggttaatgtatgatgctatgatataataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                      |  |  | | |   |  || |  |||     |||  ||   || |||  || |  |   | ||  ||    |    | ||  |     |    || || ||||||||||||| || || ||||| ||||| ||||||||||| ||  |||| ||||| |||||||| ||||| ||||| ||||| |||||||||||||| |
---------------------gacgtcccctttcgctctcatt--tttcaaccatacctgagaattattacgaatgggatctgaaaatgacacaccctttattttccctgaattgaactgcagATTTTGGCTCCTCTCCCGATTGGGTTTGCAGTGTTCTTGGTTCATCTGGCAACCATCCCCATCACCGGAACCGGCATCAACCCTGCTAGGAGTCTCGGGG

upper sequence: GLYMA08G01860.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 2
gtatgtattctttcccactacaatattgcttattcattccactaatttggtttataaatggctatattctgactttgtaattaatgtggttaatgtatgatgctatgatataataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
     | ||||||   | |   |   |  |||    | | |  ||| ||      ||   |    || |  |  ||| | |||   |     |      || ||   |||||     || |||||||||| || || |||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||
-----ttttctttggtagttagagggtagttaccattactagaaatgtg------aacaagtcccatacaaatcttg-agttaccctaaccga-----aattcttgaatata-----tgcagATTTTGGCCCCCCTCCCCATTGGGTTTGCAGTGTTCTTGGTTCACTTGGCCACCATCCCCATCACAGGAACTGGCATTAACCCAGCCAGGAGTCTTGGAG

upper sequence: GLYMA08G01860.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv15s0046g02420.t01 (Vitis vinifera), 3'ss of exon 2
gtatgtattctttcccactacaatattgcttattcattccactaatttggtttataaatggctatattctgactttgtaattaatgtggttaatgtatgatgctatgatataataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
          ||| || ||     |||  | |  |||||  || ||    ||||| | ||   ||     |  | || || |||   |     | | |  | ||  | |     || || ||||||||||||| || |||||||| ||||| ||||||||||| ||  |||| ||||| |||||||| ||||| ||||| ||||| ||||||||||| || |
-------ccattttcctct----catttttcaaccattc--ctgatggtatttattattgcaaatg----ggatctgaaaataacacgccctttatttt-tcctgcgttg----aactgcagATTTTGGCTCCTCTCCCCATTGGGTTTGCAGTGTTCTTGGTTCATCTGGCAACCATCCCCATCACCGGAACCGGCATCAACCCTGCTAGGAGTCTGGGGG

upper sequence: GLYMA08G01860.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S1_535V6.2 (Physcomitrella patens), 3'ss of exon 2
--gtatgtattct-ttcccactacaatattgcttattcattccactaatttggtttataaatggctatattctgactttgtaattaatgtggttaatgtatgatgctatgatataataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
  |  |  | ||  || ||  | || |   | |      | || |   |  |   |       | | | |  |     |   | | |  ||||      |||||||| |   ||   | ||| || |  | || || |||||||| ||||| || || ||| |||| |||||||| |||||||||||||| ||||||||||| ||||| ||  | ||||| || |
gtgagtacactccgtttccggtgcagttcagttctagattaccgcgcctgagacgtgctggctgatctttggtactcctcacagttagatggtctcaaaatgatgctcttcgatgg-acttgcagGTGCTTGCGCCTCTTCCCATCGGATTCGCAGTTTTCCTGGTGCACTTGGCCACCATTCCCATCACCGGAACTGGCATCAACCCCGCCCGTAGTCTAGGTG

upper sequence: GLYMA08G01860.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S305_12V6.1 (Physcomitrella patens), 3'ss of exon 2
gtatgtattctttcccactacaatattgcttattcattccactaatttggtttataaatggctatattctgactttgtaattaatgtggttaatgtatgatgctatgatataataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                   | | | | |||   | | |    |||     | |    |  || |   | ||| |   | |  ||  |  |   || |  |   | || | |  |   || || | ||||| || |||||||| |||||||| |||||| |||| |||||||| |||||||||||||| || ||  |||| ||||||||| | |||||||| |
----------------ggaagactgtggctagctaagtatcgtaacaatatctt---acagcaaggctttgaatgactgagaaacataatctctg-accaccgtctgttgt--ttcgtgcagTTGTTGGCACCTCTTCCCATCGGATTTGCAGTGTTCCTGGTGCACTTGGCCACCATTCCCATCACTGGTACAAGCATCAACCCAGCTCGCAGTCTCGGCG

upper sequence: GLYMA08G01860.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S102_107V6.1 (Physcomitrella patens), 3'ss of exon 2
-----------------------gtatgtattctttcccactacaat------attgcttattcattccactaatttggtt---tataaatggctat--attctgactttgtaat-taatgtggttaatgtatgatgctatgatataataa----------------ttgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                       |||  | |   || |    | | |       | | |   |  |  |||| ||||  |    | | ||| |||    |    ||| |   ||  |||       |||  |  |  ||   | | || ||                ||| || |  | || || ||||| |||||||| || |||||  |||| || ||||| |||||||||||||| ||||||||||||||||| ||  | ||||| || |
gtatgtttcacttattcacggtggtacatttcaattacagggaaagttggagggtggatgtgttttatcactgatttaatcagatctgaattgctgctgacgacgacataaaaaaataaaaataaaaataaaaaaaactgaaacaaaaaaaataaaaactcttcgtcttgcagGTGCTTGCCCCTCTTCCTATTGGATTCGCAGTGTTTCTGGTACATTTGGCCACCATTCCCATCACCGGAACTGGCATTAACCCTGCACGTAGTCTGGGCG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208171563|gb|GD967130.1|GD967130
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|209713451|gb|BW679253.1|BW679253
EST:     AGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: AGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193305246|gb|FK270407.1|FK270407
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|208036320|gb|GD835565.1|GD835565
EST:     ATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: ATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31473970|gb|CD415998.1|CD415998
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31473068|gb|CD415096.1|CD415096
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|192297999|gb|FG988413.1|FG988413
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193427091|gb|FK397090.1|FK397090
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|6964336|gb|AW433029.1|AW433029
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTACCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|208185795|gb|GD983820.1|GD983820
EST:     TGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|207694055|gb|GD675102.1|GD675102
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGC
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTT-GGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGC
EST: gi|10232248|gb|BE801136.1|BE801136
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193304092|gb|FK271185.1|FK271185
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|214008371|gb|DB986313.1|DB986313
EST:     TTTTGTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31465520|gb|CD407548.1|CD407548
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|207695675|gb|GD677198.1|GD677198
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGC
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagA-TTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGC
EST: gi|207788930|gb|GD760278.1|GD760278
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31463980|gb|CD406008.1|CD406008
EST:     AGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: AGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193379777|gb|FK345335.1|FK345335
EST:     AGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: AGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31466573|gb|CD408601.1|CD408601
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31311203|gb|CD396406.1|CD396406
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193307898|gb|FK271542.1|FK271542
EST:     CTAGAGACTCTTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: CTAGAGACTC-TCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193385277|gb|FK352739.1|FK352739
EST:     CTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTT-CCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: CTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193433002|gb|FK395710.1|FK395710
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31305582|gb|CD390785.1|CD390785
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193446570|gb|FK413157.1|FK413157
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGTTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|22522357|gb|BU081168.1|BU081168
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|208141725|gb|GD939539.1|GD939539
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGG
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGG
EST: gi|6072113|gb|AW101500.1|AW101500
EST:     TTT-CTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ANTTTGGCTTCACTTCCC
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCC
EST: gi|31464161|gb|CD406189.1|CD406189
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31560937|gb|CD486775.1|CD486775
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|6726487|gb|AW310841.1|AW310841
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|16346247|gb|BI971842.1|BI971842
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|6725948|gb|AW310347.1|AW310347
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|6095240|gb|AW119907.1|AW119907
EST:     AAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: AAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|207799331|gb|GD769170.1|GD769170
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTT
EST: gi|31473817|gb|CD415845.1|CD415845
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|192330400|gb|FK022615.1|FK022615
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|208122527|gb|GD925375.1|GD925375
EST:     GACTCTCACGTTCCTT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGC
genomic: GACTCTCACGTTCC-Tgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGC
EST: gi|208237390|gb|GE035230.1|GE035230
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCACTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193351184|gb|FK316746.1|FK316746
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193436782|gb|FK399541.1|FK399541
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|208292628|gb|GE093750.1|GE093750
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31463750|gb|CD405778.1|CD405778
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31461519|gb|CD403547.1|CD403547
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193405313|gb|FK372634.1|FK372634
EST:     CTAGAGACTCTTCACGTTCCT                         A-TTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: CTAGAGACTC-TCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|7590667|gb|AW706477.1|AW706477
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193322086|gb|FK287006.1|FK287006
EST:     CTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: CTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31458370|gb|CD400398.1|CD400398
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193362471|gb|FK325309.1|FK325309
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193585727|gb|FK541211.1|FK541211
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|10710525|gb|BF010243.1|BF010243
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|13480718|gb|BG510061.1|BG510061
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193435986|gb|FK398974.1|FK398974
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193363859|gb|FK329665.1|FK329665
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTG
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTG
EST: gi|19938517|gb|BQ081757.1|BQ081757
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31472445|gb|CD414473.1|CD414473
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|31468209|gb|CD410237.1|CD410237
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|208236071|gb|GE033407.1|GE033407
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTG
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTG
EST: gi|193390471|gb|FK356419.1|FK356419
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193450025|gb|FK412579.1|FK412579
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGC
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGC
EST: gi|192298833|gb|FG988654.1|FG988654
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|193542736|gb|FK501089.1|FK501089
EST:     TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCACACGTTCCT                         ATTTTGGCTCCACTTCCCATCGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: TTTTCTCTGCCACTGATGCCAAGAGAAACGCTAGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
EST: gi|6095052|gb|AW119719.1|AW119719
EST:     AGAGACTCTCACGTTCCT                         ATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT
genomic: AGAGACTCTCACGTTCCTgtatgtattc ... ataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctgactttgtaattaatgtggttaatgtatgatgctatgatataataattgtagATTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCTTGGTCCACTTGGCTACCATTCCCATCACAGGAACTGGCATTAACCCAGCTAGGAGTCTCGGAG
                                    tatgatataataattg  TA-rich tract