Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatatctctcagtaatcaaagtttttatttttattttctgtttaattattatagtttgtgtattgaaattgttgttgtgttcgggtgattttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAACGGTAGACTGAACAAGTGTGGGGTTATTAGTCCCCG

Basic information

species Glycine max
transcript GLYMA07G38520.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA07G38520.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G083497_T04 (Zea mays), 3'ss of exon 1
gtatatctctcagtaatcaaagtttttatttttattttctgtttaattattatagtttgtgtattgaaattgttgttgtgttcgggtgattttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAACGGTAGACTGAACAAGTGTGGGGTTATTAGTCCCCG
                     |||  | | |  || |  ||    |||   || |   |  |   ||   |       || |  | || | | || || |||||||||||| ||||| ||||| || ||||||||||| ||||| || || ||||| ||| ||||||| ||||| ||||| || || || ||||| |||||
---------------------gttagt-tctcaatctcgtgccccatttcaattggcagcattccgaggatacgtacctgattag-tgctatattatt-agGATACATTGGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATTGTGGTGGAACTGAACGGCAGACTAAACAAATGCGGTGTAATTAGCCCCCG

upper sequence: GLYMA07G38520.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G018228_T04 (Zea mays), 3'ss of exon 2
gtatatctctcagtaatcaaagtttttatttttattttctgtttaattattatagtttgtgtattgaaattgttgttgtgttcgggtgattttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAACGGTAGACTGAACAAGTGTGGGGTTATTAGTCCCCG
                |     |  | |   ||||   |  || ||||  |  | | || | ||  |      || | | ||    |  || | | || ||| |||||||| ||||| ||||| || ||||||||||| ||||| || |||||||| ||  |||| || |||||||| || ||||| |||||||| || ||
--------------gttagccctcctcaaccttatgcccatttgaattgcttcattctgaggat--acgcccctgat-tatt---attgttctatatt-agGTTACATTGGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATCGTGGTGGAGCTGAATGGAAGACTGAATAAATGTGGTGTTATTAGCCCACG

upper sequence: GLYMA07G38520.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G328578_T01 (Zea mays), 3'ss of exon 2
gtatatctctcagtaatcaaagtttttatttttattttctgtttaattattatagtttgtgtattgaaattgttgttgtgttcgggtgattttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAACGGTAGACTGAACAAGTGTGGGGTTATTAGTCCCCG
                |     |  | |   ||||   |  || ||||  |  | | || | ||  |  |   || | | ||    |  || | | || ||| |||||| | ||||| ||||| || ||||||||||| ||||| || |||||||| ||  |||| || |||||||| || ||||| |||||||| || ||
--------------gttagccctcctcaaccttatgcccatttgaattgcttcattctgaggat--acgtccctgat-tatt---attgttctatatt-agGCTACATTAGCGAGTTCGAGTACGTGGATGACCACAGAGCTGGGAAGATCGTGGTGGAGCTGAATGGAAGACTGAATAAATGTGGTGTTATTAGCCCACG

upper sequence: GLYMA07G38520.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G177720_T01 (Zea mays), 3'ss of exon 1
gtatatctctcagtaatcaaagtttttatttttattttctgtttaattattatagtttgtgtattgaaattgttgttgtgttcgggtgattttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAACGGTAGACTGAACAAGTGTGGGGTTATTAGTCCCCG
            || | | | |   |     ||||   |||||| | |      |  |   |   ||     |     || ||   ||   | || | |||| |||||||||||||| ||||| |||||||||||| |  | || || |||||||| ||| | ||||| || ||||||||||| || || || || || ||
------------gttagcta-gcactcgaccttatgccctgtttcaat------gactccattccgaggacatgtccatgatcat-tgtgctgttatgtagGCTACATTGGAGAGTTCGAGTACGTTGATGACCACCGATCGGGCAAGATCGTGGTCGAACTCAACGGGAGGCTGAACAAGTGCGGCGTCATCAGCCCTCG

upper sequence: GLYMA07G38520.1 (Glycine max), 3'ss of exon 2
lower sequence: GRMZM2G059624_T01 (Zea mays), 3'ss of exon 1
gtatatctctcagtaatcaaagtttttatttttattttctgtttaattattata-gtttgtgtattgaaattgttgttg--tgttcgggtgattttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAACGGTAGACTGAACAAGTGTGGGGTTATTAGTCCCCG
         | ||| |||    |||  |||||  ||| |   ||  |      | |    |   |   |||| |  |     ||    ||     ||| |  ||| || ||  | |||||| |||||||||| ||||| || ||||| |  || || ||||| |||||||| || ||||||||||||||  | || ||||| ||
--------gttagttatctttatttacatttt-gtttgcaacttgttggaagcaaggaaatagttctcaattctcatgagtcgtgaatgttgccctttctacagGGTATATCAGTGAGTTTTAGTATGTTGACGACCATAGAGCTGGAAGGATAGTCGTTGAGTTGAACGGCAGGCTGAACAAGTGTGGACTGATCAGTCCTCG

upper sequence: GLYMA07G38520.1 (Glycine max), 3'ss of exon 2
lower sequence: Vv13s0019g00530.t01 (Vitis vinifera), 3'ss of exon 3
----------------gtatatctctcagtaatcaaagtttttatttttattttctgtttaattattatagtttgtgtattg---aaattgttgtt---gtgttcgggtgattttttgtt------tagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAACGGTAGACTGAACAAGTGTGGGGTTATTAGTCCCCG
                 |  || ||  | |  |  || ||| | || || ||| || ||  ||| || |  |||||    ||   | ||| || ||   || ||    ||||||| | ||       ||| ||||||||||||||||||||||||||||| |||||| |||| || || || |||||| |||| || ||||| ||||| ||||||||||| ||||||||
gtactaatcaattcatttgaatttcagattgtttcaattttcttttcttctttacttttgcattgtttttttttgttacctgtgtacatttttattcacgtattttactgattttattttgctctacagGTTACATTGGAGAGTTTGAGTATGTTGATGATCACAGGTCTGGAAAGATTGTTGTTGAACTGAATGGAAGACTAAACAAATGTGGGGTTATCAGTCCCCG

upper sequence: GLYMA07G38520.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S1_304V6.1 (Physcomitrella patens), 3'ss of exon 1
---gtatatctctcagtaatcaaagtttttatttttattttctgtttaattattata-gtttgtgtattgaaattgttgttgtgttcgggtgattttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAACGGTAGACTGAACAAGTGTGGGGTTATTAGTCCCCG
     ||  || | | |  |  ||    || ||| | ||   |||  ||  ||  |  |  | |  | | | || |   || | |    || ||   | |   |||||| ||||||||||||||    |||||||||||||| || || ||||||||||| ||  ||||||||||| |||||||||| || ||||| ||||||||
gacacatgcctttta-tgttggaacgaattgtttct-ttaaatgtaaaagaatcctgcggatttacactaacat-gcacttttctgtatgtcatccctcg--cagGATATATTGGAGAGTTTGAACTGGTTGATGACCACAGAGCGGGGAAAATCGTGGTGGAGCTGAACGGTAGATTGAACAAGTGCGGTGTTATCAGTCCCCG

upper sequence: GLYMA07G38520.1 (Glycine max), 3'ss of exon 2
lower sequence: PP1S115_101V6.1 (Physcomitrella patens), 3'ss of exon 1
gtatatctctcagtaatcaaagtttttatttttattttctgtttaattattatagtttgtgtattgaaattgttgttgtgttcgggtg---attttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAACGGTAGACTGAACAAGTGTGGGGTTATTAGTCCCCG
   ||    | ||  | ||       || |  | ||    | |  |   |  |    || |  |||||  ||  ||| | ||    |    || ||   || ||| |||||||||||||||||   ||| |||||||||||||| || ||||| ||||| ||  ||||||| ||  ||||||||||||| || || ||||||||
---taatagtaagggaacatgtaacgtagtcatgttggtggatcgagcgtcctttcatgagc-ttgaacctgacgttcttttaaaatatacatattcatttcagGCTACATTGGAGAGTTTGAACTTGTGGATGACCACAGGGCAGGGAAAATTGTGGTGGAGCTGAACGGCAGGTTGAACAAGTGTGGTGTGATCAGTCCCCG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|6133914|gb|AW132307.1|AW132307
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGGTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|298184105|gb|HO029318.1|HO029318
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|298166619|gb|HO010058.1|HO010058
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|193349469|gb|FK318587.1|FK318587
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTAGGTAAAATC
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCT-GGTAAAATC
EST: gi|298196981|gb|HO041748.1|HO041748
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATACAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|16284410|gb|BI946072.1|BI946072
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|19268708|gb|BM884964.1|BM884964
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|193612386|gb|FK560961.1|FK560961
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|16280654|gb|BI944077.1|BI944077
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|192322844|gb|FK014775.1|FK014775
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|298168973|gb|HO020277.1|HO020277
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|298198924|gb|HO042287.1|HO042287
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|16279110|gb|BI943263.1|BI943263
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|16277146|gb|BI942227.1|BI942227
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|193467448|gb|FK432561.1|FK432561
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|209725800|gb|BW657984.1|BW657984
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|26268251|gb|CA819314.1|CA819314
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|192301517|gb|FG994757.1|FG994757
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|192323402|gb|FK018993.1|FK018993
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|298170922|gb|HO015898.1|HO015898
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|16281501|gb|BI944520.1|BI944520
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|16996759|gb|BM086131.1|BM086131
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|298197436|gb|HO044915.1|HO044915
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|31474829|gb|CD416857.1|CD416857
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|298175576|gb|HO018287.1|HO018287
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|193600319|gb|FK554196.1|FK554196
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACA                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|15812952|gb|BI785227.1|BI785227
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|16282413|gb|BI945003.1|BI945003
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
EST: gi|208130537|gb|GD932860.1|GD932860
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAG
EST: gi|16278609|gb|BI942992.1|BI942992
EST:     GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACG                         GATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG
genomic: GCCATCCTCCAAAGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGgtatatctct ... ttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttattatagtttgtgtattgaaattgttgttgtgttcgggtgattttttgtttagGATACATTGGAGAGTTTGAGTATGTTGATGACCACAGGGCTGGTAAAATCGTGGTTGAATTGAACGGTAGACTGAACAAGTGTGGGGTTATTAGTCCCCG
                                           ttttttgttt  CT-rich tract
                                        tgattttttgttta  TA-rich tract