Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|254337266|gb|GR845049.1|GR845049EST: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGG CTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
genomic: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGGgtaaaccctt ... gtgtcatcagCTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
EST:
gi|254342746|gb|GR858908.1|GR858908EST: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGG CTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
genomic: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGGgtaaaccctt ... gtgtcatcagCTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
EST:
gi|308099059|gb|HO760900.1|HO760900EST: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGG CTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
genomic: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGGgtaaaccctt ... gtgtcatcagCTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
EST:
gi|254319728|gb|GR829132.1|GR829132EST: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGG CTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
genomic: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGGgtaaaccctt ... gtgtcatcagCTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
EST:
gi|254341147|gb|GR854875.1|GR854875EST: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGG CTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
genomic: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGGgtaaaccctt ... gtgtcatcagCTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
EST:
gi|23727462|gb|BU761764.1|BU761764EST: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGG CTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
genomic: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGGgtaaaccctt ... gtgtcatcagCTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
EST:
gi|254319727|gb|GR829131.1|GR829131EST: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGG CTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
genomic: GATTGGCTGAATCAAAAATACCAGCTAGCAGGAAAATTGGGTCCATGAGGgtaaaccctt ... gtgtcatcagCTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.ctcaatgtttctttataattgacatttcccttggtgttgttcgatgtgtcatcagCTGGATGACTGGGTCTTGTGCAGGATCTATAAGAAGAAGAGCATGGTAAAAGCATTGGAGCACAAAGAGGCACACCCAGAAGTCCAAATTGCTAATCTTG
aattgac putative branch site (score: 3)
tttataattgacattt TA-rich tract